RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 AS3MTQ9HBK9 375 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 RABGAP1Q9Y3P9 1069 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 AFG3L2Q9Y4W6 797 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 SAMM50Q9Y512 469 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 PCDHA2Q9Y5H9 948 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 DOCK5Q9H7D0 1870 aa15.7■□□□□ 0.1
ACTN1-205ENST00000538545 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
ACTN1-205ENST00000538545 MYBP10242 640 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 PGM5Q15124 567 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 SULF1Q8IWU6 871 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 SCFD1Q8WVM8 642 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 DCPSQ96C86 337 aaKnown RBP15.69■□□□□ 0.1
ACTN1-205ENST00000538545 OTUD5Q96G74 571 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 ADARB2Q9NS39 739 aaKnown RBP15.69■□□□□ 0.1
ACTN1-205ENST00000538545 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-205ENST00000538545 FSTL1Q12841 308 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 TKFCQ3LXA3 575 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 EAPPQ56P03 285 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-205ENST00000538545 MIIPQ5JXC2 388 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 MYOCDQ8IZQ8 938 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-205ENST00000538545 REPS2Q8NFH8 660 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 THAP9Q9H5L6 903 aa15.69■□□□□ 0.1
ACTN1-205ENST00000538545 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
ACTN1-205ENST00000538545 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 PTPN14Q15678 1187 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 MCTP2Q6DN12 878 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 RAD9BQ6WBX8 426 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 MB21D1Q8N884 522 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 NOC4LQ9BVI4 516 aaKnown RBP15.68■□□□□ 0.1
ACTN1-205ENST00000538545 RBBP6Q7Z6E9 1792 aaKnown RBP15.68■□□□□ 0.1
ACTN1-205ENST00000538545 TTC26A0AVF1 554 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 TRAF5O00463 557 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 IRF6O14896 467 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 DSG3P32926 999 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 TRAF1Q13077 416 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-205ENST00000538545 SUPT20HL1Q3ZLR7 823 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 GUF1Q8N442 669 aaKnown RBP15.68■□□□□ 0.1
ACTN1-205ENST00000538545 ANKRD20A12PQ8NF67 263 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 ZNF507Q8TCN5 953 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 LXNQ9BS40 222 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-205ENST00000538545 AGPAT5Q9NUQ2 364 aa15.68■□□□□ 0.1
ACTN1-205ENST00000538545 BICDL2A1A5D9 508 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 RASSF10A6NK89 507 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 SPDYE16A6NNV3 312 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 FANCGO15287 622 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 DHX15O43143 795 aaKnown RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 MFAP3LO75121 409 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 ABL1P00519 1130 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 APBA1Q02410 837 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 SPAG1Q07617 926 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 MTMR1Q13613 665 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 COG2Q14746 738 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 SYCP1Q15431 976 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 ARHGEF16Q5VV41 709 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 RINT1Q6NUQ1 792 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 CATSPERGQ6ZRH7 1159 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 NYAP1Q6ZVC0 841 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 CCDC65Q8IXS2 484 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 PDCD2LQ9BRP1 358 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 PPP2R5CQ13362 524 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 ZC2HC1CQ53FD0 456 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 LRRC55Q6ZSA7 311 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 PCMTD1Q96MG8 357 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 CHP1Q99653 195 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 TEKT3Q9BXF9 490 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 PXMP2Q9NR77 195 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 EPHB6O15197 1021 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 NMT1P30419 496 aaKnown RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 HOXD13P35453 343 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 KRT9P35527 623 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 NAA30Q147X3 362 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 UGCGQ16739 394 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 UTP14CQ5TAP6 766 aaKnown RBP15.67■□□□□ 0.1
ACTN1-205ENST00000538545 SYT10Q6XYQ8 523 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 GADL1Q6ZQY3 521 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 TFR2Q9UP52 801 aa15.67■□□□□ 0.1
ACTN1-205ENST00000538545 KIAA1217Q5T5P2 1943 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 BRCA2P51587 3418 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 ERVK-24P63145 666 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 MCF2L2Q86YR7 1114 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 SMCR8Q8TEV9 937 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-205ENST00000538545 EHMT1Q9H9B1 1298 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
ACTN1-205ENST00000538545 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 CNTN2Q02246 1040 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 REXO1L1PQ8IX06 675 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-205ENST00000538545 MRPL44Q9H9J2 332 aaKnown RBP15.66■□□□□ 0.1
ACTN1-205ENST00000538545 AGO4Q9HCK5 861 aaKnown RBP15.66■□□□□ 0.1
ACTN1-205ENST00000538545 A1CFQ9NQ94 594 aaKnown RBP15.66■□□□□ 0.1
ACTN1-205ENST00000538545 PPP2R2CQ9Y2T4 447 aa15.66■□□□□ 0.1
ACTN1-205ENST00000538545 CLIC2O15247 247 aa15.65■□□□□ 0.1
ACTN1-205ENST00000538545 EYA4O95677 639 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms