RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 PTGDRQ13258 359 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 UTP14CQ5TAP6 766 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 SMAP1Q8IYB5 467 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 SENP6Q9GZR1 1112 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 TMEM60Q9H2L4 133 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 MCM3APO60318 1980 aa12.68□□□□□ -0.38
TRAPPC4-211ENST00000533012 WDR64B1ANS9 1081 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 CHMP2AO43633 222 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 PSAPP07602 524 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 HOXD8P13378 290 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 PURAQ00577 322 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 PPP2R5CQ13362 524 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 SF3A1Q15459 793 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 ABHD15Q6UXT9 468 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 C4orf32Q8N8J7 132 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 RDM1Q8NG50 284 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 GLG1Q92896 1179 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 UNC45AQ9H3U1 944 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 AZI2Q9H6S1 392 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 STARD7Q9NQZ5 370 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 TELO2Q9Y4R8 837 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 ATP6V1DQ9Y5K8 247 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 LRRC37A2A6NM11 1700 aa12.67□□□□□ -0.38
TRAPPC4-211ENST00000533012 A0A1W2PQ45 241 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 A0A1W2PQY0 241 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 H3BRB1 525 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 BACH1O14867 736 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 LGALS2P05162 132 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 SUPT20HL2P0C7V6 817 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 COL6A1P12109 1028 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 TECP42680 631 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 STAT5BP51692 787 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 JAK3P52333 1124 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 SWSAP1Q6NVH7 229 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 C16orf70Q9BSU1 422 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 KATNAL1Q9BW62 490 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 TUT1Q9H6E5 874 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 ZNF215Q9UL58 517 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 ZDHHC9Q9Y397 364 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
TRAPPC4-211ENST00000533012 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 LGR5O75473 907 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 DDIT3P35638 169 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 PRPHP41219 470 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 CEBPZQ03701 1054 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 ITGA7Q13683 1181 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 PDIA5Q14554 519 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 EPHA7Q15375 998 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 ARL6IP4Q66PJ3 421 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 SLC39A5Q6ZMH5 540 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 SEZ6LQ9BYH1 1024 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 ERAP1Q9NZ08 941 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-211ENST00000533012 BRCA2P51587 3418 aa12.65□□□□□ -0.39
TRAPPC4-211ENST00000533012 MYH7BA7E2Y1 1941 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 KIAA1217Q5T5P2 1943 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 F2P00734 622 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 ZNF286BP0CG31 522 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 PSEN2P49810 448 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 SLC26A2P50443 739 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 PSMC6P62333 389 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 MFSD10Q14728 455 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 KAT2BQ92831 832 aa12.64□□□□□ -0.39
TRAPPC4-211ENST00000533012 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms