RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 NOL8Q76FK4 1167 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 NCAPG2Q86XI2 1143 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 C2orf69Q8N8R5 385 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 FANCBQ8NB91 859 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 SMC1BQ8NDV3 1235 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 GTF3C6Q969F1 213 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 WDR18Q9BV38 432 aa11.63□□□□□ -0.55
CCDC90B-206ENST00000526265 CPLX1O14810 134 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 OIP5O43482 229 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 ALAS2P22557 587 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 USP14P54578 494 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 MLLT1Q03111 559 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 RRP1BQ14684 758 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 MICU3Q86XE3 530 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 SPACA7Q96KW9 195 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
CCDC90B-206ENST00000526265 GOLGA8AA7E2F4 631 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 C19orf81C9J6K1 198 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 TOMM70O94826 608 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 BCRP11274 1271 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 YY1P25490 414 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 SMARCA1P28370 1054 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 ASPRV1Q53RT3 343 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 GPATCH4Q5T3I0 446 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 NUP133Q8WUM0 1156 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 DCAF4Q8WV16 495 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 LPAR1Q92633 364 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 RBSNQ9H1K0 784 aa11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 CWC22Q9HCG8 908 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-206ENST00000526265 WIPF1O43516 503 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 ZNF16P17020 682 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 PTPRAP18433 802 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 PPATQ06203 517 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 SCRN1Q12765 414 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 STK3Q13188 491 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 PRKG1Q13976 671 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 GRM4Q14833 912 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 FAM35AQ86V20 835 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 ERO1BQ86YB8 467 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 CEP120Q8N960 986 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 FEZ1Q99689 392 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 KIAA1683Q9H0B3 1180 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 GBA2Q9HCG7 927 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 NPHS2Q9NP85 383 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 OTOFQ9HC10 1997 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 F5H6K3 240 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 CELF2O95319 508 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 GHRHP01286 108 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 JAG1P78504 1218 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 KLRC3Q07444 240 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 FSTL1Q12841 308 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 VGLL4Q14135 290 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 CCDC83Q8IWF9 413 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 ZNF408Q9H9D4 720 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 NAGPAQ9UK23 515 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
CCDC90B-206ENST00000526265 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 J3QW42 95 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 TRAF5O00463 557 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 LARGE1O95461 756 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 CELA2BP08218 269 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 PDHBP11177 359 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 CPB1P15086 417 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 IFNAR1P17181 557 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 EIF2AK2P19525 551 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 SLC1A4P43007 532 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 BACE1P56817 501 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 AKAP17AQ02040 695 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 KIAA0319Q5VV43 1072 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 PEAR1Q5VY43 1037 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 HFE2Q6ZVN8 426 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 LRRC47Q8N1G4 583 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 NECAB1Q8N987 351 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 GALNT6Q8NCL4 622 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 WASF1Q92558 559 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 FRMD6Q96NE9 622 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 SNCAIPQ9Y6H5 919 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
CCDC90B-206ENST00000526265 PASKQ96RG2 1323 aa11.58□□□□□ -0.56
CCDC90B-206ENST00000526265 STK36Q9NRP7 1315 aa11.58□□□□□ -0.56
CCDC90B-206ENST00000526265 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms