RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 BCS1LQ9Y276 419 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 ATP6V0A2Q9Y487 856 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 COL4A3BPQ9Y5P4 624 aa14.45□□□□□ -0.1
CAPN1-202ENST00000524773 SART1O43290 800 aaKnown RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 RAD21O60216 631 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 FAM107AO95990 144 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 SERPING1P05155 500 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 GSCP56915 257 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 SETQ01105 290 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 RPS6KA1Q15418 735 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 ZNF571Q7Z3V5 609 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 DGKHQ86XP1 1220 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 TAF4BQ92750 862 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 TAF1DQ9H5J8 278 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 VCPKMTQ9H867 229 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 AJAP1Q9UKB5 411 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.44□□□□□ -0.13e-6■■■■■ 38.5
CAPN1-202ENST00000524773 KCNQ2O43526 872 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 MARCH6O60337 910 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 RPSAP08865 295 aaKnown RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 PRPHP41219 470 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 PRPF4BQ13523 1007 aaKnown RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 LLGL1Q15334 1064 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 VPS72Q15906 364 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 CCDC121Q6ZUS5 278 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 FAM228AQ86W67 206 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 MYOCDQ8IZQ8 938 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 RAPGEF5Q92565 580 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 C6orf50Q9HD87 102 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 BSDC1Q9NW68 430 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-202ENST00000524773 LEMD3Q9Y2U8 911 aa14.44□□□□□ -0.1
CAPN1-202ENST00000524773 LOC102724428A0A0B4J2F2 783 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 TLDC2A0PJX2 215 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 RASA1P20936 1047 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 STAT3P40763 770 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 EPS15P42566 896 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 SIK1P57059 783 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 SLC18A3Q16572 532 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 KRT25Q7Z3Z0 450 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 GUF1Q8N442 669 aaKnown RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 METTL13Q8N6R0 699 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 ANKS1AQ92625 1134 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 RAD54LQ92698 747 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 TBC1D31Q96DN5 1066 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 AK8Q96MA6 479 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 ANKRD36CQ5JPF3 1778 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 H0YGN5 161 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 HGSO14964 777 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 CASP5P51878 434 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 SPTY2D1Q68D10 685 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 CEP95Q96GE4 821 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 CUEDC2Q9H467 287 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 PANK4Q9NVE7 773 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 SEC63Q9UGP8 760 aaKnown RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 ATP8A1Q9Y2Q0 1164 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 NFS1Q9Y697 457 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 A0A1B0GUL6 1792 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 GMNCA6NCL1 334 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 KRIT1O00522 736 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 PCP11498 1178 aaKnown RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 TNFRSF8P28908 595 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 PDE6BP35913 854 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 SLC16A2P36021 539 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 BYSLQ13895 437 aaKnown RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 ASIC2Q16515 512 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 KRT71Q3SY84 523 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 GLE1Q53GS7 698 aaKnown RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 DCAF17Q5H9S7 520 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 EYA3Q99504 573 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 TSG101Q99816 390 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 MTFR1LQ9H019 292 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 GOPCQ9HD26 462 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 CEP72Q9P209 647 aa14.43□□□□□ -0.1
CAPN1-202ENST00000524773 CHORDC1Q9UHD1 332 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 NOC2LQ9Y3T9 749 aaKnown RBP14.43□□□□□ -0.1
CAPN1-202ENST00000524773 MEIS1O00470 390 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 SHBGP04278 402 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 RDXP35241 583 aaKnown RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 DHX9Q08211 1270 aaKnown RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 HERC4Q5GLZ8 1057 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 RNF10Q8N5U6 811 aaKnown RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 SEC16BQ96JE7 1060 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 MTMR9Q96QG7 549 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 SRP68Q9UHB9 627 aaKnown RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 SSU72P8A0A1W2PR75 194 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 LAD1O00515 517 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 KIF4AO95239 1232 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 HSPA9P38646 679 aaKnown RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 USP8P40818 1118 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 TNNC1P63316 161 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 ZNF211Q13398 564 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 PARP10Q53GL7 1025 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 FAM26FQ5R3K3 315 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 TCERG1LQ5VWI1 586 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 AADACL2Q6P093 401 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 SLC30A10Q6XR72 485 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 DAGLBQ8NCG7 672 aa14.42□□□□□ -0.1
CAPN1-202ENST00000524773 N4BP2L2Q92802 583 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-202ENST00000524773 KIAA1024Q9UPX6 916 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms