RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	EIF3J	O75822	258 aa	Known RBP	12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	ITGB1	P05556	798 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	ATF7	P17544	494 aa	Predicted RBP	12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	HOXC8	P31273	242 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	PTH1R	Q03431	593 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	COL9A3	Q14050	684 aa	Predicted RBP	12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	BTG3	Q14201	252 aa	Predicted RBP	12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	HSDL1	Q3SXM5	330 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	TBC1D10C	Q8IV04	446 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	SUSD6	Q92537	303 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	P2RX5	Q93086	422 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	TMEM47	Q9BQJ4	181 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	NAPB	Q9H115	298 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	ADGRA3	Q8IWK6	1321 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	WDR19	Q8NEZ3	1342 aa		12.58	□□□□□ -0.4
SORBS3-222	ENST00000524057	SORBS3	O60504	671 aa		12.57	□□□□□ -0.4
SORBS3-222	ENST00000524057	RANBP6	O60518	1105 aa	Known RBP	12.57	□□□□□ -0.4
SORBS3-222	ENST00000524057	RBM10	P98175	930 aa	Known RBP	12.57	□□□□□ -0.4
SORBS3-222	ENST00000524057	USH1G	Q495M9	461 aa		12.57	□□□□□ -0.4
SORBS3-222	ENST00000524057	RMDN3	Q96TC7	470 aa		12.57	□□□□□ -0.4
SORBS3-222	ENST00000524057	MRVI1	Q9Y6F6	885 aa		12.57	□□□□□ -0.4
SORBS3-222	ENST00000524057	WDR87	Q6ZQQ6	2873 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057		H3BRB1	525 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	CAND2	O75155	1236 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	DGKI	O75912	1065 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	SMIM10L2A	P0DMW4	78 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	SMIM10L2B	P0DMW5	78 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	PDHB	P11177	359 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	TOP1	P11387	765 aa	Known RBP	12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	HAND2	P61296	217 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	NAALADL2	Q58DX5	795 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	FAM26D	Q5JW98	314 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	KLHL23	Q8NBE8	558 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	ATP8B4	Q8TF62	1192 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	POF1B	Q8WVV4	589 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	RMDN1	Q96DB5	314 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	CCDC136	Q96JN2	1154 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	SPATA33	Q96N06	139 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	MAF1	Q9H063	256 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	TUT1	Q9H6E5	874 aa	Known RBP	12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	DIAPH3	Q9NSV4	1193 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	PCDHGC5	Q9Y5F6	944 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	ZMYM6	O95789	1325 aa		12.56	□□□□□ -0.4
SORBS3-222	ENST00000524057	PER2	O15055	1255 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	SGSM2	O43147	1006 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	CHRNA1	P02708	482 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	NR3C2	P08235	984 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	SP2	Q02086	613 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	CELF3	Q5SZQ8	465 aa	Known RBP	12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	ARHGEF16	Q5VV41	709 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	ZBTB33	Q86T24	672 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	KREMEN2	Q8NCW0	462 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	TLE6	Q9H808	572 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	SETD4	Q9NVD3	440 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	PPP4R2	Q9NY27	417 aa		12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	MRPL42	Q9Y6G3	142 aa	Known RBP	12.55	□□□□□ -0.4
SORBS3-222	ENST00000524057	ZFHX4	Q86UP3	3567 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	ORC4	O43929	436 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	EIF2AK2	P19525	551 aa	Known RBP	12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	ZNF543	Q08ER8	600 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	BMP2KL	Q5H9B9	411 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	MCTP2	Q6DN12	878 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	DGLUCY	Q7Z3D6	616 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	VN1R2	Q8NFZ6	395 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	DSCC1	Q9BVC3	393 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	S1PR5	Q9H228	398 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	CPVL	Q9H3G5	476 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	BCAS3	Q9H6U6	928 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	EHMT1	Q9H9B1	1298 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	GVINP1	Q7Z2Y8	2422 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	NEDD4	P46934	1319 aa		12.54	□□□□□ -0.4
SORBS3-222	ENST00000524057	KIAA1217	Q5T5P2	1943 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	CACNA1B	Q00975	2339 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	ZNF292	O60281	2723 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	PPFIA3	O75145	1194 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	BRD1	O95696	1058 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	GGPS1	O95749	300 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	SNHG28	P0DPA3	235 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	ASTL	Q6HA08	431 aa	Predicted RBP	12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	UBALD2	Q8IYN6	164 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	CRIPAK	Q8N1N5	446 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	MICAL1	Q8TDZ2	1067 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	CNTNAP3B	Q96NU0	1288 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	CNTNAP3	Q9BZ76	1288 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	UBA5	Q9GZZ9	404 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	PXMP2	Q9NR77	195 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	TCP11L1	Q9NUJ3	509 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	DMXL1	Q9Y485	3027 aa		12.53	□□□□□ -0.4
SORBS3-222	ENST00000524057	MYH7B	A7E2Y1	1941 aa		12.52	□□□□□ -0.4
SORBS3-222	ENST00000524057	HIP1	O00291	1037 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	GOLGA8H	P0CJ92	632 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	GHR	P10912	638 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	SP100	P23497	879 aa	Predicted RBP	12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	ADAM17	P78536	824 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	LPIN1	Q14693	890 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	KCNV1	Q6PIU1	500 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	STOX1	Q6ZVD7	989 aa		12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.52	□□□□□ -0.41
SORBS3-222	ENST00000524057	MCF2L2	Q86YR7	1114 aa		12.52	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms