RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ABHD8	Q96I13	439 aa		11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	DUSP9	Q99956	384 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	NUDT12	Q9BQG2	462 aa		11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	ZNF577	Q9BSK1	485 aa		11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	KIAA1683	Q9H0B3	1180 aa		11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	TUFT1	Q9NNX1	390 aa		11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	CNOT7	Q9UIV1	285 aa	Known RBP	11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	DOCK5	Q9H7D0	1870 aa		11.93	□□□□□ -0.5
SPIDR-222	ENST00000524006	LRRC10B	A6NIK2	292 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	SOWAHD	A6NJG2	315 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	FAM86B1	E9PN63	330 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	CALU	O43852	315 aa	Predicted RBP	11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	AOC2	O75106	756 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	MED24	O75448	989 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	FAM86B2	P0C5J1	330 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	FDX1	P10109	184 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	ALAS1	P13196	640 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	HIRA	P54198	1017 aa	Predicted RBP	11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	RBM10	P98175	930 aa	Known RBP	11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	CYP4A11	Q02928	519 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	GRM1	Q13255	1194 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	CENPP	Q6IPU0	288 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	FOXR2	Q6PJQ5	311 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	TOGARAM2	Q6ZUX3	1019 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	KCNK18	Q7Z418	384 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	KIAA1328	Q86T90	577 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	TMEM139	Q8IV31	216 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	TXLNB	Q8N3L3	684 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	SAMD3	Q8N6K7	520 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	OR8K1	Q8NGG5	319 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	HPS3	Q969F9	1004 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	CEP63	Q96MT8	703 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	DESI2	Q9BSY9	194 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	TBC1D7	Q9P0N9	293 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	PGAP2	Q9UHJ9	254 aa		11.92	□□□□□ -0.5
SPIDR-222	ENST00000524006	SHTN1	A0MZ66	631 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	MEIS1	O00470	390 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	RRP9	O43818	475 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	URI1	O94763	535 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	CELF2	O95319	508 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	EYA4	O95677	639 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	CYP11B2	P19099	503 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	FXR1	P51114	621 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	UBXN2A	P68543	259 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	FKBP3	Q00688	224 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	RAD51AP2	Q09MP3	1159 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	MTMR2	Q13614	643 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	VWA3B	Q502W6	1294 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	CEP55	Q53EZ4	464 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	SAPCD2	Q86UD0	394 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	CCDC84	Q86UT8	332 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	CDAN1	Q8IWY9	1227 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	CPXCR1	Q8N123	301 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	NEK11	Q8NG66	645 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	TRPM4	Q8TD43	1214 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	HOMER2	Q9NSB8	354 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	FBXO28	Q9NVF7	368 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	TMOD4	Q9NZQ9	345 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	COL4A3BP	Q9Y5P4	624 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	PPP2R3B	Q9Y5P8	575 aa		11.91	□□□□□ -0.5
SPIDR-222	ENST00000524006	ARHGEF35	A5YM69	484 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	CETN3	O15182	167 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	EDIL3	O43854	480 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	PPP1R12B	O60237	982 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	MUT	P22033	750 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	RPL13	P26373	211 aa	Known RBP	11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	MAP2K2	P36507	400 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	KRT83	P78385	493 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	ZBED6	P86452	979 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	MAP3K10	Q02779	954 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	PPP2R5C	Q13362	524 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	LRRC41	Q15345	812 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	KIAA1755	Q5JYT7	1200 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	SAMD7	Q7Z3H4	446 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	MIER3	Q7Z3K6	550 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	CACNA2D4	Q7Z3S7	1137 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	CATSPER3	Q86XQ3	398 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	TPH2	Q8IWU9	490 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	REXO1L1P	Q8IX06	675 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	NELFCD	Q8IXH7	590 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	SCYL3	Q8IZE3	742 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	SYT2	Q8N9I0	419 aa	Predicted RBP	11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	EHBP1	Q8NDI1	1231 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	CRYGN	Q8WXF5	182 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	SLC5A5	Q92911	643 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	LENG9	Q96B70	501 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	DNAJC19	Q96DA6	116 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	WRNIP1	Q96S55	665 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	DEFB129	Q9H1M3	183 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	BHMT2	Q9H2M3	363 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	SEMA6B	Q9H3T3	888 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	DEF6	Q9H4E7	631 aa		11.9	□□□□□ -0.5
SPIDR-222	ENST00000524006	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms