RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 ERO1AQ96HE7 468 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 ABHD8Q96I13 439 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 DUSP9Q99956 384 aaKnown RBP11.93□□□□□ -0.5
SPIDR-204ENST00000517824 NUDT12Q9BQG2 462 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 POLR3CQ9BUI4 534 aaPredicted RBP11.93□□□□□ -0.5
SPIDR-204ENST00000517824 KIAA1683Q9H0B3 1180 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 TUFT1Q9NNX1 390 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
SPIDR-204ENST00000517824 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
SPIDR-204ENST00000517824 LRRC10BA6NIK2 292 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 SOWAHDA6NJG2 315 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 FAM86B1E9PN63 330 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 CALUO43852 315 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-204ENST00000517824 AOC2O75106 756 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 MED24O75448 989 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 FAM86B2P0C5J1 330 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 FDX1P10109 184 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 ALAS1P13196 640 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 HIRAP54198 1017 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-204ENST00000517824 RBM10P98175 930 aaKnown RBP11.92□□□□□ -0.5
SPIDR-204ENST00000517824 CYP4A11Q02928 519 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 GRM1Q13255 1194 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 PABPC4Q13310 644 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPIDR-204ENST00000517824 CENPPQ6IPU0 288 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 TOGARAM2Q6ZUX3 1019 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-204ENST00000517824 KCNK18Q7Z418 384 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 TMEM139Q8IV31 216 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 TXLNBQ8N3L3 684 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 SAMD3Q8N6K7 520 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 CEP63Q96MT8 703 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 DESI2Q9BSY9 194 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 TBC1D7Q9P0N9 293 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-204ENST00000517824 PGAP2Q9UHJ9 254 aa11.92□□□□□ -0.5
SPIDR-204ENST00000517824 SHTN1A0MZ66 631 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 MEIS1O00470 390 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 RRP9O43818 475 aaKnown RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 EYA4O95677 639 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 CYP11B2P19099 503 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 FXR1P51114 621 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 UBXN2AP68543 259 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 RAD51AP2Q09MP3 1159 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 MTMR2Q13614 643 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 HSP90AA2PQ14568 343 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 CEP55Q53EZ4 464 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 SAPCD2Q86UD0 394 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 CCDC84Q86UT8 332 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 NEK11Q8NG66 645 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 EIF2AK1Q9BQI3 630 aaKnown RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 GLIS2Q9BZE0 524 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-204ENST00000517824 HOMER2Q9NSB8 354 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 FBXO28Q9NVF7 368 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 TMOD4Q9NZQ9 345 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 COL4A3BPQ9Y5P4 624 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 PPP2R3BQ9Y5P8 575 aa11.91□□□□□ -0.5
SPIDR-204ENST00000517824 ARHGEF35A5YM69 484 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 CETN3O15182 167 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 EDIL3O43854 480 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 MUTP22033 750 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 RPL13P26373 211 aaKnown RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 MAP2K2P36507 400 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 KRT83P78385 493 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 ZBED6P86452 979 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 MAP3K10Q02779 954 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 PPP2R5CQ13362 524 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 LRRC41Q15345 812 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 KIAA1755Q5JYT7 1200 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 SAMD7Q7Z3H4 446 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 MIER3Q7Z3K6 550 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 CACNA2D4Q7Z3S7 1137 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 TPH2Q8IWU9 490 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 REXO1L1PQ8IX06 675 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 NELFCDQ8IXH7 590 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 SCYL3Q8IZE3 742 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 SYT2Q8N9I0 419 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-204ENST00000517824 EHBP1Q8NDI1 1231 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 CRYGNQ8WXF5 182 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 SLC5A5Q92911 643 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 LENG9Q96B70 501 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 DNAJC19Q96DA6 116 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 WRNIP1Q96S55 665 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 BHMT2Q9H2M3 363 aa11.9□□□□□ -0.5
SPIDR-204ENST00000517824 SEMA6BQ9H3T3 888 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms