RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 DIAPH1O60610 1272 aaKnown RBP8.49□□□□□ -1.05
VIM-207ENST00000495528 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
VIM-207ENST00000495528 ZNF792Q3KQV3 632 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 RALGPS1Q5JS13 557 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 SLC23A3Q6PIS1 610 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 ZPBP2Q6X784 338 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 EEPD1Q7L9B9 569 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
VIM-207ENST00000495528 ZNF496Q96IT1 587 aaPredicted RBP8.49□□□□□ -1.05
VIM-207ENST00000495528 MBNL3Q9NUK0 354 aaKnown RBP8.49□□□□□ -1.05
VIM-207ENST00000495528 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 AKT3Q9Y243 479 aa8.49□□□□□ -1.05
VIM-207ENST00000495528 SF3B6Q9Y3B4 125 aaKnown RBP8.49□□□□□ -1.05
VIM-207ENST00000495528 A0A087WZG4 1122 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 VAMP4O75379 141 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 STARD3NLO95772 234 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 GSNP06396 782 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 RNASE1P07998 156 aaKnown RBP8.48□□□□□ -1.05
VIM-207ENST00000495528 HSPA1AP0DMV8 641 aaKnown RBP8.48□□□□□ -1.05
VIM-207ENST00000495528 HSPA1BP0DMV9 641 aaKnown RBP8.48□□□□□ -1.05
VIM-207ENST00000495528 NAT2P11245 290 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 TEKQ02763 1124 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 DPY19L1Q2PZI1 675 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 PRR5LQ6MZQ0 368 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 TTC5Q8N0Z6 440 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 LRRN4CLQ8ND94 238 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 IL17REQ8NFR9 667 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 ALPK1Q96QP1 1244 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 BRIP1Q9BX63 1249 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 ADAMTS10Q9H324 1103 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 CGGBP1Q9UFW8 167 aaPredicted RBP8.48□□□□□ -1.05
VIM-207ENST00000495528 DIS3Q9Y2L1 958 aaKnown RBP8.48□□□□□ -1.05
VIM-207ENST00000495528 SBF1O95248 1867 aa8.48□□□□□ -1.05
VIM-207ENST00000495528 MRC1P22897 1456 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 CD3EP07766 207 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 VAV1P15498 845 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 PDE6BP35913 854 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 HK2P52789 917 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 CC2D1BQ5T0F9 858 aaKnown RBP8.47□□□□□ -1.05
VIM-207ENST00000495528 ZNF790Q6PG37 636 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 RNF111Q6ZNA4 994 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
VIM-207ENST00000495528 CDADC1Q9BWV3 514 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 RC3H2Q9HBD1 1191 aaKnown RBP8.47□□□□□ -1.05
VIM-207ENST00000495528 SIRPGQ9P1W8 387 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 SCN11AQ9UI33 1791 aa8.47□□□□□ -1.05
VIM-207ENST00000495528 NOP56O00567 594 aaKnown RBP8.46□□□□□ -1.06
VIM-207ENST00000495528 KCNQ3O43525 872 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 DDNO94850 711 aaPredicted RBP8.46□□□□□ -1.06
VIM-207ENST00000495528 KCNH1O95259 989 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 A1BGP04217 495 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 GSTM1P09488 218 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 BMP8BP34820 402 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 IL6STP40189 918 aaPredicted RBP8.46□□□□□ -1.06
VIM-207ENST00000495528 ZNF143P52747 638 aaPredicted RBP8.46□□□□□ -1.06
VIM-207ENST00000495528 SOGA3Q5TF21 947 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 BVESQ8NE79 360 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 TEX13AQ9BXU3 409 aaPredicted RBP8.46□□□□□ -1.06
VIM-207ENST00000495528 AP5S1Q9NUS5 200 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 ZMYM5Q9UJ78 669 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 KIF7Q2M1P5 1343 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 HEG1Q9ULI3 1381 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.06
VIM-207ENST00000495528 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
VIM-207ENST00000495528 CAMTA2O94983 1202 aa8.45□□□□□ -1.06
VIM-207ENST00000495528 POU4F1Q01851 419 aa8.45□□□□□ -1.06
VIM-207ENST00000495528 TEFQ10587 303 aa8.45□□□□□ -1.06
VIM-207ENST00000495528 CNGB1Q14028 1251 aaPredicted RBP8.45□□□□□ -1.06
VIM-207ENST00000495528 SLC10A6Q3KNW5 377 aa8.45□□□□□ -1.06
VIM-207ENST00000495528 ARHGEF39Q8N4T4 335 aa8.45□□□□□ -1.06
VIM-207ENST00000495528 SRPK1Q96SB4 655 aaKnown RBP8.45□□□□□ -1.06
VIM-207ENST00000495528 TAOK3Q9H2K8 898 aa8.45□□□□□ -1.06
VIM-207ENST00000495528 GPR55Q9Y2T6 319 aaPredicted RBP8.45□□□□□ -1.06
VIM-207ENST00000495528 TNRC6CQ9HCJ0 1690 aaKnown RBP8.45□□□□□ -1.06
VIM-207ENST00000495528 TMEM82A0PJX8 343 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 STXBP3O00186 592 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 PDPK1O15530 556 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 ZNF205O95201 554 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 ITGAVP06756 1048 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 SRGNP10124 158 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 IFNGR1P15260 489 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 PIP4K2AP48426 406 aaPredicted RBP8.44□□□□□ -1.06
VIM-207ENST00000495528 SERINC3Q13530 473 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 CNBD1Q8NA66 436 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 RCC1LQ96I51 464 aaKnown RBP8.44□□□□□ -1.06
VIM-207ENST00000495528 FMNL2Q96PY5 1086 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 MCMBPQ9BTE3 642 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 SLC12A9Q9BXP2 914 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 LNPKQ9C0E8 428 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 TMEM59LQ9UK28 342 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 EMC9Q9Y3B6 208 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 USP16Q9Y5T5 823 aa8.44□□□□□ -1.06
VIM-207ENST00000495528 PRAMEF22A3QJZ6 481 aa8.43□□□□□ -1.06
VIM-207ENST00000495528 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
VIM-207ENST00000495528 NPHP1O15259 732 aa8.43□□□□□ -1.06
VIM-207ENST00000495528 TBX1O43435 398 aa8.43□□□□□ -1.06
VIM-207ENST00000495528 NOP2P46087 812 aaKnown RBP8.43□□□□□ -1.06
VIM-207ENST00000495528 AMPD2Q01433 879 aa8.43□□□□□ -1.06
VIM-207ENST00000495528 DDX10Q13206 875 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms