RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ARSHQ5FYA8 562 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 FAM26FQ5R3K3 315 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 ANKRD40Q6AI12 368 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 B3GNT9Q6UX72 402 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 GUF1Q8N442 669 aaKnown RBP18.6■□□□□ 0.57
CTSA-207ENST00000484855 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
CTSA-207ENST00000484855 DUSP9Q99956 384 aaKnown RBP18.6■□□□□ 0.57
CTSA-207ENST00000484855 DDX39AO00148 427 aaKnown RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 IRF6O14896 467 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 EYA4O95677 639 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 COPB1P53618 953 aaKnown RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 RAD51AP2Q09MP3 1159 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 EPHA7Q15375 998 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 TPH2Q8IWU9 490 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 PURBQ96QR8 312 aaKnown RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 AGO4Q9HCK5 861 aaKnown RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 SPTLC3Q9NUV7 552 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 TAB2Q9NYJ8 693 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 A0A0G2JLL6 359 aaPredicted RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 LRRC10BA6NIK2 292 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 NRDCO43847 1150 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 SLITRK3O94933 977 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 MUTP22033 750 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 CENPPQ6IPU0 288 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 PRRT2Q7Z6L0 340 aaPredicted RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 IRF2BP1Q8IU81 584 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 PROCA1Q8NCQ7 364 aaPredicted RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
CTSA-207ENST00000484855 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
CTSA-207ENST00000484855 FRMD3A2A2Y4 597 aa18.58■□□□□ 0.57
CTSA-207ENST00000484855 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.57
CTSA-207ENST00000484855 N4BP3O15049 544 aa18.58■□□□□ 0.57
CTSA-207ENST00000484855 EEF1GP26641 437 aaKnown RBP18.58■□□□□ 0.57
CTSA-207ENST00000484855 TBX2Q13207 712 aaPredicted RBP18.58■□□□□ 0.57
CTSA-207ENST00000484855 VPS16Q9H269 839 aa18.58■□□□□ 0.57
CTSA-207ENST00000484855 SEMA6BQ9H3T3 888 aa18.58■□□□□ 0.57
CTSA-207ENST00000484855 MYH11P35749 1972 aa18.58■□□□□ 0.56
CTSA-207ENST00000484855 CCND2P30279 289 aa18.58■□□□□ 0.56
CTSA-207ENST00000484855 HERC4Q5GLZ8 1057 aaPredicted RBP18.58■□□□□ 0.56
CTSA-207ENST00000484855 XRRA1Q6P2D8 792 aa18.58■□□□□ 0.56
CTSA-207ENST00000484855 MYOCDQ8IZQ8 938 aa18.58■□□□□ 0.56
CTSA-207ENST00000484855 CYP39A1Q9NYL5 469 aa18.58■□□□□ 0.56
CTSA-207ENST00000484855 CXCL11O14625 94 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 ITGB3BPQ13352 177 aaPredicted RBP18.57■□□□□ 0.56
CTSA-207ENST00000484855 GIT2Q14161 759 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 LRRC41Q15345 812 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.57■□□□□ 0.56
CTSA-207ENST00000484855 ARMC9Q7Z3E5 817 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 MIER3Q7Z3K6 550 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 PNMA8AQ86V59 439 aaPredicted RBP18.57■□□□□ 0.56
CTSA-207ENST00000484855 FAM114A1Q8IWE2 563 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 GLIS3Q8NEA6 775 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 NEK9Q8TD19 979 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 REEP2Q9BRK0 252 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 ZHX3Q9H4I2 956 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 A1CFQ9NQ94 594 aaKnown RBP18.57■□□□□ 0.56
CTSA-207ENST00000484855 TBC1D7Q9P0N9 293 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 WDR81Q562E7 1941 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 TESPA1A2RU30 521 aaPredicted RBP18.57■□□□□ 0.56
CTSA-207ENST00000484855 DHX15O43143 795 aaKnown RBP18.57■□□□□ 0.56
CTSA-207ENST00000484855 PBX1P40424 430 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 PPIL2Q13356 520 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 LBX2Q6XYB7 198 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 PIGOQ8TEQ8 1089 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 LXNQ9BS40 222 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 MAF1Q9H063 256 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 TBC1D22BQ9NU19 505 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 PCDHA2Q9Y5H9 948 aa18.57■□□□□ 0.56
CTSA-207ENST00000484855 OFD1O75665 1012 aa18.56■□□□□ 0.56
CTSA-207ENST00000484855 IRX3P78415 501 aaPredicted RBP18.56■□□□□ 0.56
CTSA-207ENST00000484855 LRRC63Q05C16 580 aa18.56■□□□□ 0.56
CTSA-207ENST00000484855 MB21D1Q8N884 522 aa18.56■□□□□ 0.56
CTSA-207ENST00000484855 NSUN6Q8TEA1 469 aaKnown RBP18.56■□□□□ 0.56
CTSA-207ENST00000484855 TSG101Q99816 390 aa18.56■□□□□ 0.56
CTSA-207ENST00000484855 RUSC1Q9BVN2 902 aa18.56■□□□□ 0.56
CTSA-207ENST00000484855 DOCK5Q9H7D0 1870 aa18.56■□□□□ 0.56
CTSA-207ENST00000484855 NR3C2P08235 984 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 GOLGA8FQ08AF8 430 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 GOLGA8DPQ0D2H9 430 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 BANK1Q8NDB2 785 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 CCDC112Q8NEF3 446 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 CHST13Q8NET6 341 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 CNOT6LQ96LI5 555 aaKnown RBP18.55■□□□□ 0.56
CTSA-207ENST00000484855 NACC1Q96RE7 527 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 KCNH4Q9UQ05 1017 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 RINT1Q6NUQ1 792 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 VSIG10LQ86VR7 867 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 OPTNQ96CV9 577 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 FGFBP2Q9BYJ0 223 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 WRAP73Q9P2S5 460 aaPredicted RBP18.55■□□□□ 0.56
CTSA-207ENST00000484855 ITIH6Q6UXX5 1313 aa18.55■□□□□ 0.56
CTSA-207ENST00000484855 TBCAO75347 108 aaKnown RBP18.54■□□□□ 0.56
CTSA-207ENST00000484855 KIF20AO95235 890 aa18.54■□□□□ 0.56
CTSA-207ENST00000484855 NLRX1Q86UT6 975 aa18.54■□□□□ 0.56
CTSA-207ENST00000484855 EEF2KMTQ96G04 330 aa18.54■□□□□ 0.56
CTSA-207ENST00000484855 BTBD7Q9P203 1132 aa18.54■□□□□ 0.56
CTSA-207ENST00000484855 CLEC11AQ9Y240 323 aa18.54■□□□□ 0.56
CTSA-207ENST00000484855 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
CTSA-207ENST00000484855 TPM2P07951 284 aa18.54■□□□□ 0.56
CTSA-207ENST00000484855 FOXR2Q6PJQ5 311 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms