RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
CLIP4-208ENST00000456385 NOC2LQ9Y3T9 749 aaKnown RBP11.29□□□□□ -0.6
CLIP4-208ENST00000456385 STARD3NLO95772 234 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 CHN1P15882 459 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 KIF5BP33176 963 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 PRPHP41219 470 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 SV2BQ7L1I2 683 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 METTL13Q8N6R0 699 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 MAB21L3Q8N8X9 362 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
CLIP4-208ENST00000456385 AK8Q96MA6 479 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 FAM129AQ9BZQ8 928 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 LUC7LQ9NQ29 371 aaKnown RBP11.28□□□□□ -0.6
CLIP4-208ENST00000456385 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 C1orf167Q5SNV9 1468 aa11.28□□□□□ -0.6
CLIP4-208ENST00000456385 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.6
CLIP4-208ENST00000456385 BHMG1C9JSJ3 638 aaPredicted RBP11.27□□□□□ -0.6
CLIP4-208ENST00000456385 LAD1O00515 517 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 MMEP08473 750 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 USP11P51784 963 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 SLC8A3P57103 927 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 MTMR3Q13615 1198 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.6
CLIP4-208ENST00000456385 UNC13DQ70J99 1090 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 GUF1Q8N442 669 aaKnown RBP11.27□□□□□ -0.6
CLIP4-208ENST00000456385 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 AGAP11Q8TF27 550 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 P3H4Q92791 437 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 HOOK2Q96ED9 719 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 SWAP70Q9UH65 585 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 ZBTB1Q9Y2K1 713 aa11.27□□□□□ -0.6
CLIP4-208ENST00000456385 SMIM23A6NLE4 172 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 STXBP3O00186 592 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.61
CLIP4-208ENST00000456385 GCKP35557 465 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 PEX19P40855 299 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 TXKP42681 527 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 KCNJ2P63252 427 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 PTK2Q05397 1052 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 LRRC63Q05C16 580 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 CHRNDQ07001 517 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 GRB10Q13322 594 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 BZW1Q7L1Q6 419 aaKnown RBP11.27□□□□□ -0.61
CLIP4-208ENST00000456385 TAX1BP1Q86VP1 789 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 LMBR1Q8WVP7 490 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.61
CLIP4-208ENST00000456385 TLCD1Q96CP7 247 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.61
CLIP4-208ENST00000456385 SELENOSQ9BQE4 189 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLIP4-208ENST00000456385 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 IL17RBQ9NRM6 502 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 C15orf41Q9Y2V0 281 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 NR2E1Q9Y466 385 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 MYH7BA7E2Y1 1941 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 ABCB11O95342 1321 aa11.27□□□□□ -0.61
CLIP4-208ENST00000456385 CICQ96RK0 1608 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 FAM170AA1A519 330 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 TRAF5O00463 557 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 FGFR1OPO95684 399 aaKnown RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ZBTB48P10074 688 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 GRIK3Q13003 919 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 LRRC57Q8N9N7 239 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ZNF483Q8TF39 744 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PIGBQ92521 554 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PRCCQ92733 491 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 CALML4Q96GE6 196 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ZNF570Q96NI8 536 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 FGFBP2Q9BYJ0 223 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 DCP1AQ9NPI6 582 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ABCF3Q9NUQ8 709 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 KIF13AQ9H1H9 1805 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 MYH3P11055 1940 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 TLDC2A0PJX2 215 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ACTN1P12814 892 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 COPB2P35606 906 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 INHBEP58166 350 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 UBAP2Q5T6F2 1119 aaKnown RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ZNF571Q7Z3V5 609 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 KCNK18Q7Z418 384 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PIGWQ7Z7B1 504 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ATXN2LQ8WWM7 1075 aaKnown RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 LARP4BQ92615 738 aaKnown RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 DDX12PQ92771 950 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PBKQ96KB5 322 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PNMA5Q96PV4 448 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 PRMT1Q99873 361 aaKnown RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 ADAM7Q9H2U9 754 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms