RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CHGBP05060 677 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 PORP16435 677 aaPredicted RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 CCT6AP40227 531 aaKnown RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 GALK1P51570 392 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 PPP2R2AP63151 447 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 OTUD6AQ7L8S5 288 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 FAM133AQ8N9E0 248 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 STKLD1Q8NE28 680 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 RUBCNQ92622 972 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 XPO6Q96QU8 1125 aaKnown RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 DDX23Q9BUQ8 820 aaKnown RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 TMBIM4Q9HC24 238 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 AASDHPPTQ9NRN7 309 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 SAMD15Q9P1V8 674 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 PNMA2Q9UL42 364 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 TDRKHQ9Y2W6 561 aaKnown RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 NFE2L3Q9Y4A8 694 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 AOX1Q06278 1338 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 MYH7P12883 1935 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 A0A1W2PQ27 194 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 A0A1W2PQ64 194 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 A0A1W2PQD8 194 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 PRAMEF22A3QJZ6 481 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 PI4KAP2A4QPH2 592 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 MFAP3LO75121 409 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 ITIH4Q14624 930 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 TMTC1Q8IUR5 882 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 MMGT1Q8N4V1 131 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 PI4KAP1Q8N8J0 262 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 SYT2Q8N9I0 419 aaPredicted RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 IFT81Q8WYA0 676 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 FAM136AQ96C01 138 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 NEK1Q96PY6 1258 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 CTAGE1Q96RT6 745 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 NFU1Q9UMS0 254 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 MYH13Q9UKX3 1938 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 H0Y3Z8 333 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 LMBRD2Q68DH5 695 aaPredicted RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 CCSAPQ6IQ19 270 aaPredicted RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 ZC3H18Q86VM9 953 aaKnown RBP10.18□□□□□ -0.78
PTPRA-204ENST00000380393 ATP8B4Q8TF62 1192 aa10.18□□□□□ -0.78
PTPRA-204ENST00000380393 WDR17Q8IZU2 1322 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 SRCAPQ6ZRS2 3230 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 ALDH1L1O75891 902 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 WFS1O76024 890 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 TJP3O95049 919 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 TATP17735 454 aaPredicted RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CASP14P31944 242 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 ZNF131P52739 623 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CYP4A11Q02928 519 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 TBL3Q12788 808 aaKnown RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 ZNF589Q86UQ0 364 aaPredicted RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 C1orf131Q8NDD1 294 aaKnown RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 NGLY1Q96IV0 654 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 ELAC2Q9BQ52 826 aaKnown RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 MRGBPQ9NV56 204 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CTNNAL1Q9UBT7 734 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 NHSL1Q5SYE7 1610 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CPDO75976 1380 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 TEX33O43247 280 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CTNND1O60716 968 aaKnown RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 ATP9AO75110 1047 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 FAM153BP0C7A2 387 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 SKIP12755 728 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 PTDSS1P48651 473 aaKnown RBP10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CCT8P50990 548 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 PPARAQ07869 468 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CCDC153Q494R4 210 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 FAM153CQ494X1 144 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 C1orf141Q5JVX7 400 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 SIX5Q8N196 739 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 TTC30BQ8N4P2 665 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 GDAP1Q8TB36 358 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 CENPKQ9BS16 269 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 RAB17Q9H0T7 212 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 EURLQ9NYK6 297 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 FAM153AQ9UHL3 310 aa10.17□□□□□ -0.78
PTPRA-204ENST00000380393 NVLO15381 856 aaKnown RBP10.16□□□□□ -0.78
PTPRA-204ENST00000380393 STK10O94804 968 aaKnown RBP10.16□□□□□ -0.78
PTPRA-204ENST00000380393 PAEPP09466 180 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 DIXDC1Q155Q3 683 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 ZC2HC1CQ53FD0 456 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-204ENST00000380393 CCDC122Q5T0U0 273 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 FAM182BQ5T319 152 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 BEND3Q5T5X7 828 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 CNGA4Q8IV77 575 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 MAP4K1Q92918 833 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 MPP4Q96JB8 637 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 CNOT8Q9UFF9 292 aaKnown RBP10.16□□□□□ -0.78
PTPRA-204ENST00000380393 MYH8P13535 1937 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 BIRC5O15392 142 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 SLC26A4O43511 780 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 MGEA5O60502 916 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 POTEJP0CG39 1038 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 TPBGLP0DKB5 382 aa10.16□□□□□ -0.78
PTPRA-204ENST00000380393 IDEP14735 1019 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms