RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GPATCH11Q8N954 259 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 CYP2W1Q8TAV3 490 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 L1RE1Q9UN81 338 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 BRD3Q15059 726 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 MEA1Q16626 185 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 MIGA2Q7L4E1 593 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 TBC1D5Q92609 795 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.46■□□□□ 0.07
MSH5-202ENST00000375740 ZBTB21Q9ULJ3 1066 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 PCDHA2Q9Y5H9 948 aa15.46■□□□□ 0.07
MSH5-202ENST00000375740 ERCC3P19447 782 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 CIITAP33076 1130 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 SLC12A3P55017 1021 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 PSMC6P62333 389 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 MAN2A1Q16706 1144 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 HERC4Q5GLZ8 1057 aaPredicted RBP15.45■□□□□ 0.06
MSH5-202ENST00000375740 TMEM39BQ9GZU3 492 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 GOPCQ9HD26 462 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 ZNHIT6Q9NWK9 470 aaKnown RBP15.45■□□□□ 0.06
MSH5-202ENST00000375740 MEIS1O00470 390 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 MSH4O15457 936 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 RHOXF2BP0C7M4 288 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 SPATA31C1P0DKV0 1188 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 ZNF76P36508 570 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 KIF4BQ2VIQ3 1234 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 FIGNQ5HY92 759 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 CCDC174Q6PII3 467 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 ERMNQ8TAM6 284 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 FAM20AQ96MK3 541 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 RHOXF2Q9BQY4 288 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 TRIM10Q9UDY6 481 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
MSH5-202ENST00000375740 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 KRT18P05783 430 aaKnown RBP15.44■□□□□ 0.06
MSH5-202ENST00000375740 CORO7P57737 925 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 ZYXQ15942 572 aaKnown RBP15.44■□□□□ 0.06
MSH5-202ENST00000375740 ZCWPW2Q504Y3 356 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 HDXQ7Z353 690 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 ABCB11O95342 1321 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 A0A1W2PQJ5 194 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 CTAGE9A4FU28 777 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 TRAF5O00463 557 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 CYP3A4P08684 503 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 RPA1P27694 616 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 HERVK_113P62684 666 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 FKBP3Q00688 224 aaKnown RBP15.44■□□□□ 0.06
MSH5-202ENST00000375740 FOXR2Q6PJQ5 311 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 SRGAP1Q7Z6B7 1085 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 NELFCDQ8IXH7 590 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 CCDC102AQ96A19 550 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 NCAPGQ9BPX3 1015 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 ZHX3Q9H4I2 956 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 NHEJ1Q9H9Q4 299 aaPredicted RBP15.44■□□□□ 0.06
MSH5-202ENST00000375740 ZNRF3Q9ULT6 936 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 TFR2Q9UP52 801 aa15.44■□□□□ 0.06
MSH5-202ENST00000375740 GOLGB1Q14789 3259 aaKnown RBP15.43■□□□□ 0.06
MSH5-202ENST00000375740 RPS6KA5O75582 802 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 CFBP00751 764 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 VSNL1P62760 191 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 MMRN2Q9H8L6 949 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 MYO1AQ9UBC5 1043 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 CDC23Q9UJX2 597 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 DNM3Q9UQ16 869 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 EPHB6O15197 1021 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.06
MSH5-202ENST00000375740 FAM207AQ9NSI2 230 aaPredicted RBP15.43■□□□□ 0.06
MSH5-202ENST00000375740 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
MSH5-202ENST00000375740 LRRIQ3A6PVS8 624 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 CYLC1P35663 651 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 KRT83P78385 493 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 GIT2Q14161 759 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 CASP8Q14790 479 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 NIM1KQ8IY84 436 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 CHURC1Q8WUH1 139 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 SCFD1Q8WVM8 642 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 HNRNPLLQ8WVV9 542 aaKnown RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 HAUS4Q9H6D7 363 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 COL4A3BPQ9Y5P4 624 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 FRMD3A2A2Y4 597 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 TBC1D12O60347 775 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 TRAF1Q13077 416 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 FKBP1CQ5VVH2 108 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 DEFB132Q7Z7B7 95 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 SYT2Q8N9I0 419 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 IQCDQ96DY2 449 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 MYCBPQ99417 103 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 NAPGQ99747 312 aaPredicted RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 RANBP17Q9H2T7 1088 aaKnown RBP15.42■□□□□ 0.06
MSH5-202ENST00000375740 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 RAB21Q9UL25 225 aa15.42■□□□□ 0.06
MSH5-202ENST00000375740 IGLV3-22A0A075B6J6 115 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 EML1O00423 815 aa15.41■□□□□ 0.06
MSH5-202ENST00000375740 CAP2P40123 477 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms