RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 GLIS2Q9BZE0 524 aaPredicted RBP16.5■□□□□ 0.23
GABPB1-202ENST00000359031 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.5■□□□□ 0.23
GABPB1-202ENST00000359031 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 MRFAP1Q9Y605 127 aa16.5■□□□□ 0.23
GABPB1-202ENST00000359031 EPN1Q9Y6I3 576 aaPredicted RBP16.5■□□□□ 0.23
GABPB1-202ENST00000359031 EYA4O95677 639 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 ICAM1P05362 532 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 MUTP22033 750 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 MARSP56192 900 aaKnown RBP16.49■□□□□ 0.23
GABPB1-202ENST00000359031 TUBB2AQ13885 445 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 NAA30Q147X3 362 aaPredicted RBP16.49■□□□□ 0.23
GABPB1-202ENST00000359031 ELF2Q15723 593 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 EDRF1Q3B7T1 1238 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 CHP1Q99653 195 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 EIF2AK1Q9BQI3 630 aaKnown RBP16.49■□□□□ 0.23
GABPB1-202ENST00000359031 TUBB2BQ9BVA1 445 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 SIK3Q9Y2K2 1263 aa16.49■□□□□ 0.23
GABPB1-202ENST00000359031 NPHP3-ACAD11A0A0J9YXS1 232 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 PSMD10O75832 226 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CYLC1P35663 651 aaPredicted RBP16.48■□□□□ 0.23
GABPB1-202ENST00000359031 ARHGAP25P42331 645 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 KLK7P49862 253 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 GHRHRQ02643 423 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
GABPB1-202ENST00000359031 GIT2Q14161 759 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 LRCH2Q5VUJ6 765 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 ZNF662Q6ZS27 426 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CCDC170Q8IYT3 715 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 SCFD1Q8WVM8 642 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 WDR11Q9BZH6 1224 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 KCTD10Q9H3F6 313 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 EMILIN3Q9NT22 766 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 PARP14Q460N5 1801 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 SHTN1A0MZ66 631 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 EFCAB8A8MWE9 144 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 TRAF5O00463 557 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 TADA3O75528 432 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 HNRNPH3P31942 346 aaKnown RBP16.48■□□□□ 0.23
GABPB1-202ENST00000359031 HSD17B4P51659 736 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 PSMC6P62333 389 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 KRT83P78385 493 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CCDC40Q4G0X9 1142 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 OTOP1Q7RTM1 612 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 KRT26Q7Z3Y9 468 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 REEP2Q9BRK0 252 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
GABPB1-202ENST00000359031 FGFBP2Q9BYJ0 223 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 EDEM3Q9BZQ6 932 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.48■□□□□ 0.23
GABPB1-202ENST00000359031 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 CCPG1Q9ULG6 757 aa16.48■□□□□ 0.23
GABPB1-202ENST00000359031 V9GYY5 206 aaPredicted RBP16.48■□□□□ 0.23
GABPB1-202ENST00000359031 EML1O00423 815 aa16.47■□□□□ 0.23
GABPB1-202ENST00000359031 MEIS1O00470 390 aa16.47■□□□□ 0.23
GABPB1-202ENST00000359031 CTCFP49711 727 aaPredicted RBP16.47■□□□□ 0.23
GABPB1-202ENST00000359031 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
GABPB1-202ENST00000359031 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
GABPB1-202ENST00000359031 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
GABPB1-202ENST00000359031 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
GABPB1-202ENST00000359031 HAUS4Q9H6D7 363 aa16.47■□□□□ 0.23
GABPB1-202ENST00000359031 TBC1D7Q9P0N9 293 aa16.47■□□□□ 0.23
GABPB1-202ENST00000359031 REXO2Q9Y3B8 237 aaKnown RBP16.47■□□□□ 0.23
GABPB1-202ENST00000359031 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
GABPB1-202ENST00000359031 EIF3CLB5ME19 914 aaKnown RBP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 NKRFO15226 690 aaKnown RBP eCLIP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 GAS7O60861 476 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 TBCAO75347 108 aaKnown RBP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 IPO7O95373 1038 aaKnown RBP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 GAP43P17677 238 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 CYP4A11Q02928 519 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 PPP2R3AQ06190 1150 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 BMT2Q1RMZ1 405 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 ZNF569Q5MCW4 686 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 SFR1Q86XK3 245 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 MCF2L2Q86YR7 1114 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 NELFCDQ8IXH7 590 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 LRRN4CLQ8ND94 238 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 NEK9Q8TD19 979 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 EIF3CQ99613 913 aaKnown RBP16.46■□□□□ 0.23
GABPB1-202ENST00000359031 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 CARD6Q9BX69 1037 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 PRDM10Q9NQV6 1147 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 ZNF536O15090 1300 aa16.46■□□□□ 0.23
GABPB1-202ENST00000359031 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 CTAGE9A4FU28 777 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 INPP5BP32019 993 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms