RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MMRN2Q9H8L6 949 aa24.91■■□□□ 1.58
MCF2L-201ENST00000261963 PCDHA2Q9Y5H9 948 aa24.91■■□□□ 1.58
MCF2L-201ENST00000261963 SSBP05455 408 aaKnown RBP eCLIP24.91■■□□□ 1.58
MCF2L-201ENST00000261963 CCDC84Q86UT8 332 aaPredicted RBP24.91■■□□□ 1.58
MCF2L-201ENST00000261963 CRYGNQ8WXF5 182 aa24.91■■□□□ 1.58
MCF2L-201ENST00000261963 SAR1BQ9Y6B6 198 aa24.91■■□□□ 1.58
MCF2L-201ENST00000261963 SRGAP2O75044 1071 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 PLA2G4BP0C869 781 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 PPFIA1Q13136 1202 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 C2CD5Q86YS7 1000 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 BAP1Q92560 729 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 SCN9AQ15858 1988 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 SHTN1A0MZ66 631 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 STAT3P40763 770 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 FKBP1AP62942 108 aaKnown RBP24.9■■□□□ 1.58
MCF2L-201ENST00000261963 RPGRIP1Q96KN7 1286 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 GDAP1L1Q96MZ0 367 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 MMS19Q96T76 1030 aa24.9■■□□□ 1.58
MCF2L-201ENST00000261963 NPHP3-ACAD11A0A0J9YXS1 232 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 AGPSO00116 658 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 CCDC172P0C7W6 258 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 INPP5BP32019 993 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 RBM5P52756 815 aaKnown RBP eCLIP24.89■■□□□ 1.58
MCF2L-201ENST00000261963 SNAP25P60880 206 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 HDLBPQ00341 1268 aaKnown RBP24.89■■□□□ 1.58
MCF2L-201ENST00000261963 ICA1Q05084 483 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 CCDC155Q8N6L0 562 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 BCAS4Q8TDM0 211 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 CAPS2Q9BXY5 557 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 TBC1D7Q9P0N9 293 aa24.89■■□□□ 1.58
MCF2L-201ENST00000261963 ECE2O60344 883 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 FBXW10Q5XX13 1052 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 BMP2KQ9NSY1 1161 aaPredicted RBP24.88■■□□□ 1.57
MCF2L-201ENST00000261963 LRRC53A6NM62 1247 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 MED24O75448 989 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 GDF11O95390 407 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 FKBP3Q00688 224 aaKnown RBP24.88■■□□□ 1.57
MCF2L-201ENST00000261963 CACNB1Q02641 598 aaPredicted RBP24.88■■□□□ 1.57
MCF2L-201ENST00000261963 MSL1Q68DK7 614 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 SELENOOQ9BVL4 669 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 COL4A3BPQ9Y5P4 624 aa24.88■■□□□ 1.57
MCF2L-201ENST00000261963 MACROD2A1Z1Q3 448 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 F5H6K3 240 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 CYP11B2P19099 503 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 KLRC3Q07444 240 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 SPIRE1Q08AE8 756 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 KCNMA1Q12791 1236 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 KIF5AQ12840 1032 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 AP3B2Q13367 1082 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 KCNV1Q6PIU1 500 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 MOXD1Q6UVY6 613 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 GPBP1Q86WP2 473 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 GOLGA6BA6NDN3 693 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 NPM3O75607 178 aaKnown RBP24.87■■□□□ 1.57
MCF2L-201ENST00000261963 LCA5LO95447 670 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
MCF2L-201ENST00000261963 EIF4A3P38919 411 aaKnown RBP24.87■■□□□ 1.57
MCF2L-201ENST00000261963 KIF11P52732 1056 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 ARHGAP4P98171 946 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 CKAP4Q07065 602 aaKnown RBP24.87■■□□□ 1.57
MCF2L-201ENST00000261963 SPA17Q15506 151 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 GBP6Q6ZN66 633 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 TMEM179Q6ZVK1 233 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 RRAGAQ7L523 313 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 ETNPPLQ8TBG4 499 aa24.87■■□□□ 1.57
MCF2L-201ENST00000261963 TRAF5O00463 557 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 JAG1P78504 1218 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 CCNI2Q6ZMN8 369 aaPredicted RBP24.86■■□□□ 1.57
MCF2L-201ENST00000261963 GPIHBP1Q8IV16 184 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 ANO9A1A5B4 782 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 SLC26A4O43511 780 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 NDUFB10O96000 172 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 ARSHQ5FYA8 562 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 CCDC65Q8IXS2 484 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 SMCR8Q8TEV9 937 aaPredicted RBP24.86■■□□□ 1.57
MCF2L-201ENST00000261963 CEP83Q9Y592 693 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 PCDHA13Q9Y5I0 950 aa24.86■■□□□ 1.57
MCF2L-201ENST00000261963 EIF3HO15372 352 aaKnown RBP eCLIP24.85■■□□□ 1.577e-7■□□□□ 9.8
MCF2L-201ENST00000261963 ZMYND10O75800 440 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 SLC12A3P55017 1021 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 PDXDC1Q6P996 788 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 SLFN12Q8IYM2 578 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 CNPY4Q8N129 248 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 GMCL1P1Q8NEA9 526 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 SCFD1Q8WVM8 642 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 LENG9Q96B70 501 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 AMNQ9BXJ7 453 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 IFIH1Q9BYX4 1025 aaKnown RBP24.85■■□□□ 1.57
MCF2L-201ENST00000261963 TSGA10Q9BZW7 698 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 FRMD3A2A2Y4 597 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 POTEFA5A3E0 1075 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 PLSCR1O15162 318 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 POTEIP0CG38 1075 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 TAL1P17542 331 aaPredicted RBP24.85■■□□□ 1.57
MCF2L-201ENST00000261963 SETQ01105 290 aaPredicted RBP24.85■■□□□ 1.57
MCF2L-201ENST00000261963 POTEGQ6S5H5 508 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 POTEEQ6S8J3 1075 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 NELFCDQ8IXH7 590 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 GMCL1Q96IK5 515 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 CAPZA3Q96KX2 299 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms