RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 SMARCAL1Q9NZC9 954 aa18.76■□□□□ 0.59
KLF3-201ENST00000261438 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
KLF3-201ENST00000261438 MROH7-TTC4A0A0A0MT08 1334 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 RASA3Q14644 834 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 TMEM154Q6P9G4 183 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 KIRREL3Q8IZU9 778 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 ARL8AQ96BM9 186 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 AMACRQ9UHK6 382 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 NOC2LQ9Y3T9 749 aaKnown RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 IQSEC2Q5JU85 1478 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 PRKAB2O43741 272 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 TRIM55Q9BYV6 548 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 PDE8BO95263 885 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 IL2RBP14784 551 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 EPM2AIP1Q7L775 607 aaPredicted RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 TRAPPC11Q7Z392 1133 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 AFAP1L2Q8N4X5 818 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 ZNF653Q96CK0 615 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 BCAMP50895 628 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 MRPS35P82673 323 aaKnown RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 GEN1Q17RS7 908 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 FAM83BQ5T0W9 1011 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
KLF3-201ENST00000261438 USP15Q9Y4E8 981 aaPredicted RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.75■□□□□ 0.59
KLF3-201ENST00000261438 PNPLA6Q8IY17 1366 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 MT-ND3P03897 115 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 YWHAGP61981 247 aaKnown RBP eCLIP18.74■□□□□ 0.59
KLF3-201ENST00000261438 MYL7Q01449 175 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 LONP2Q86WA8 852 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 GRAMD1AQ96CP6 724 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 CFAP65Q6ZU64 1925 aaKnown RBP18.74■□□□□ 0.59
KLF3-201ENST00000261438 LRRN2O75325 713 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
KLF3-201ENST00000261438 SLC1A4P43007 532 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 STAMBPL1Q96FJ0 436 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 TACC3Q9Y6A5 838 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
KLF3-201ENST00000261438 ANKRD20A4Q4UJ75 823 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 ANKRD20A8PQ5CZ79 823 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 ANKRD20A2Q5SQ80 823 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 ANKRD20A1Q5TYW2 823 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 TAF6LQ9Y6J9 622 aa18.74■□□□□ 0.59
KLF3-201ENST00000261438 HNRNPCP07910 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
KLF3-201ENST00000261438 HAUS5O94927 633 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 PHEXP78562 749 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 ARHGAP4P98171 946 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 MKRN3Q13064 507 aaKnown RBP18.73■□□□□ 0.59
KLF3-201ENST00000261438 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 PNMA2Q9UL42 364 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 MAP2K7O14733 419 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 FAM178BQ8IXR5 827 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 PCCAP05165 728 aaPredicted RBP18.73■□□□□ 0.59
KLF3-201ENST00000261438 MX2P20592 715 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 MAPK4P31152 587 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 MAPKAPK5Q8IW41 473 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 FAM186BQ8IYM0 893 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 MAML1Q92585 1016 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 KCND1Q9NSA2 647 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 AGPAT5Q9NUQ2 364 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 PAX7P23759 505 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 PSMC2P35998 433 aaKnown RBP18.73■□□□□ 0.59
KLF3-201ENST00000261438 NXNQ6DKJ4 435 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 C3orf20Q8ND61 904 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.73■□□□□ 0.59
KLF3-201ENST00000261438 SCINQ9Y6U3 715 aa18.73■□□□□ 0.59
KLF3-201ENST00000261438 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 CTDNEP1O95476 244 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 ANP32DO95626 131 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 AGTP01019 485 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 HSPA9P38646 679 aaKnown RBP18.72■□□□□ 0.59
KLF3-201ENST00000261438 SCTRP47872 440 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 KIF2BQ8N4N8 673 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 TRIML2Q8N7C3 387 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 ZBTB38Q8NAP3 1195 aaPredicted RBP18.72■□□□□ 0.59
KLF3-201ENST00000261438 EYA3Q99504 573 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 SYNGAP1Q96PV0 1343 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 FAM187AA6NFU0 413 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 HARSP12081 509 aaKnown RBP18.72■□□□□ 0.59
KLF3-201ENST00000261438 PLS3P13797 630 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 CALR3Q96L12 384 aaKnown RBP18.72■□□□□ 0.59
KLF3-201ENST00000261438 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 MIS12Q9H081 205 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 ATG3Q9NT62 314 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 ADGRL3Q9HAR2 1447 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 PLEKHA8P1O95397 391 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 PDHBP11177 359 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 PARP10Q53GL7 1025 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 TBCKQ8TEA7 893 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 TGFBRAP1Q8WUH2 860 aa18.72■□□□□ 0.59
KLF3-201ENST00000261438 SLFN12Q8IYM2 578 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms