RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ZNF646O15015 1829 aaPredicted RBP21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 MED24O75448 989 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 ZNF76P36508 570 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 ERVK-24P63145 666 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 DGKZQ13574 1117 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 THAP9Q9H5L6 903 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 CXorf56Q9H5V9 222 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 USP11P51784 963 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 PSMC6P62333 389 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 TBC1D8BQ0IIM8 1120 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 TMEM119Q4V9L6 283 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 ADGRG1Q9Y653 693 aa21.49■■□□□ 1.03
LAPTM4B-204ENST00000619747 LGALS16A8MUM7 142 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 CCDC175P0C221 793 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 EEF1GP26641 437 aaKnown RBP21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 NOC4LQ9BVI4 516 aaKnown RBP21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 KCNMB3Q9NPA1 279 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 C10orf71Q711Q0 1435 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 BICDL2A1A5D9 508 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 AGPAT5Q9NUQ2 364 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 EIF3CLB5ME19 914 aaKnown RBP21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 NELFCDQ8IXH7 590 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 EIF3CQ99613 913 aaKnown RBP21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 SLF1Q9BQI6 1058 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 PIM2Q9P1W9 311 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 TMX2Q9Y320 296 aa21.48■■□□□ 1.03
LAPTM4B-204ENST00000619747 DNAJC21Q5F1R6 531 aaKnown RBP21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 ZNF507Q8TCN5 953 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 GLT8D2Q9H1C3 349 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 PLA2G4BP0C869 781 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 TRIM21P19474 475 aaKnown RBP21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 PABPC4Q13310 644 aaKnown RBP eCLIP21.47■■□□□ 1.034e-7■■□□□ 12.9
LAPTM4B-204ENST00000619747 GPBP1Q86WP2 473 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 EXOC4Q96A65 974 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 DNAJC19Q96DA6 116 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 PANK4Q9NVE7 773 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 ITIH6Q6UXX5 1313 aa21.47■■□□□ 1.03
LAPTM4B-204ENST00000619747 KRT18P05783 430 aaKnown RBP21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 CATSPER3Q86XQ3 398 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 LENG9Q96B70 501 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 GOPCQ9HD26 462 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 TFR2Q9UP52 801 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 PVALEFA0A1B0GWK0 134 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 COASYQ13057 564 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 AP3B2Q13367 1082 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 JDP2Q8WYK2 163 aa21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 LUC7L2Q9Y383 392 aaKnown RBP21.46■■□□□ 1.03
LAPTM4B-204ENST00000619747 CHMP2AO43633 222 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 HERC4Q5GLZ8 1057 aaPredicted RBP21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 CENPPQ6IPU0 288 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 LEKR1Q6ZMV7 388 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 ETNPPLQ8TBG4 499 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 CRYGNQ8WXF5 182 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 BCAS3Q9H6U6 928 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 ASTN2O75129 1339 aaPredicted RBP21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 MSH4O15457 936 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 RASA3Q14644 834 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 BMP2KQ9NSY1 1161 aaPredicted RBP21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 RGL1Q9NZL6 768 aa21.45■■□□□ 1.02
LAPTM4B-204ENST00000619747 CAP2P40123 477 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 BTNL9Q6UXG8 535 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 CCDC91Q7Z6B0 441 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 MNS1Q8NEH6 495 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 MYOZ2Q9NPC6 264 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 ARFGEF1Q9Y6D6 1849 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 DNM2P50570 870 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 MIIPQ5JXC2 388 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 CIAPIN1Q6FI81 312 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 SAMD7Q7Z3H4 446 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 CCDC155Q8N6L0 562 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 FAM212AQ96EL1 285 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 NT5C3AQ9H0P0 336 aa21.44■■□□□ 1.02
LAPTM4B-204ENST00000619747 CYP3A7-CYP3A51PA0A087WV96 503 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 CYP3A7P24462 503 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 SREBF1P36956 1147 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 SPIRE1Q08AE8 756 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 FAM26FQ5R3K3 315 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 CC2D1AQ6P1N0 951 aaPredicted RBP21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 CARD6Q9BX69 1037 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 NAA15Q9BXJ9 866 aaKnown RBP21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 ZNF341Q9BYN7 854 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 DONSONQ9NYP3 566 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 BCS1LQ9Y276 419 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 SLFN12Q8IYM2 578 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 TAOK3Q9H2K8 898 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 VCPKMTQ9H867 229 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 SUFUQ9UMX1 484 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 FZD1Q9UP38 647 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 PHLPP2Q6ZVD8 1323 aa21.43■■□□□ 1.02
LAPTM4B-204ENST00000619747 H3BQF6 201 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 DALRD3Q5D0E6 543 aaKnown RBP21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 CPXCR1Q8N123 301 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 OR8K1Q8NGG5 319 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 FAM207AQ9NSI2 230 aaPredicted RBP21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 GJA3Q9Y6H8 435 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 RASSF10A6NK89 507 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 EML1O00423 815 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 CYP11B2P19099 503 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 PRAMEF18Q5VWM3 479 aa21.42■■□□□ 1.02
LAPTM4B-204ENST00000619747 CYP26C1Q6V0L0 522 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms