RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 RPGRIP1Q96KN7 1286 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 DNAJC17Q9NVM6 304 aaKnown RBP20.25■□□□□ 0.83
GABPB1-212ENST00000615671 TOM1L1O75674 476 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 SCN4BQ8IWT1 228 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 CCDC17Q96LX7 622 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 MSTO1Q9BUK6 570 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
GABPB1-212ENST00000615671 C2orf54Q08AI8 447 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 HS1BP3Q53T59 392 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 UBE2Q2Q8WVN8 375 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 SMAD1Q15797 465 aaKnown RBP20.25■□□□□ 0.83
GABPB1-212ENST00000615671 KANSL2Q9H9L4 492 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 THNSL1Q8IYQ7 743 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 PUS7LQ9H0K6 701 aaKnown RBP20.25■□□□□ 0.83
GABPB1-212ENST00000615671 BCAP29Q9UHQ4 241 aa20.25■□□□□ 0.83
GABPB1-212ENST00000615671 DBNLQ9UJU6 430 aaKnown RBP20.25■□□□□ 0.83
GABPB1-212ENST00000615671 ZKSCAN8Q15776 578 aaPredicted RBP20.24■□□□□ 0.83
GABPB1-212ENST00000615671 SPOPLQ6IQ16 392 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 TEX2Q8IWB9 1127 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 RBL2Q08999 1139 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 DENND3A2RUS2 1198 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 MOCS3O95396 460 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 FTCDO95954 541 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 ZNF467Q7Z7K2 595 aaPredicted RBP20.24■□□□□ 0.83
GABPB1-212ENST00000615671 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 PMLP29590 882 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 RNF219Q5W0B1 726 aaPredicted RBP20.24■□□□□ 0.83
GABPB1-212ENST00000615671 CCDC51Q96ER9 411 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 VCX3AQ9NNX9 186 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 PRPSAP2O60256 369 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 TTC4O95801 387 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 STX1BP61266 288 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 NR5A1Q13285 461 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 SPATA1Q5VX52 437 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
GABPB1-212ENST00000615671 SART1O43290 800 aaKnown RBP20.23■□□□□ 0.83
GABPB1-212ENST00000615671 CMA1P23946 247 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 YWHAHQ04917 246 aaPredicted RBP20.23■□□□□ 0.83
GABPB1-212ENST00000615671 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 RNF207Q6ZRF8 634 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 TTLL6Q8N841 843 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 JPH2Q9BR39 696 aaPredicted RBP20.23■□□□□ 0.83
GABPB1-212ENST00000615671 POLD4Q9HCU8 107 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 MED7O43513 233 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 SLCO1A2P46721 670 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 PHEXP78562 749 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 HAUS8Q9BT25 410 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 PI4KBQ9UBF8 816 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 CAPN7Q9Y6W3 813 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 WHAMMP3Q1A5X7 153 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 EXOC8Q8IYI6 725 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 PIGOQ8TEQ8 1089 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 HOMER3Q9NSC5 361 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
GABPB1-212ENST00000615671 PEX3P56589 373 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 SFMBT1Q9UHJ3 866 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 ELMOD1Q8N336 334 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 N4BP2L2Q92802 583 aaPredicted RBP20.23■□□□□ 0.83
GABPB1-212ENST00000615671 FAM8A1Q9UBU6 413 aa20.23■□□□□ 0.83
GABPB1-212ENST00000615671 BPIFB4P59827 614 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 SH3RF3Q8TEJ3 882 aaPredicted RBP20.22■□□□□ 0.83
GABPB1-212ENST00000615671 SSH3Q8TE77 659 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 TTC25Q96NG3 672 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 ARHGAP25P42331 645 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.22■□□□□ 0.83
GABPB1-212ENST00000615671 PPWD1Q96BP3 646 aaKnown RBP20.22■□□□□ 0.83
GABPB1-212ENST00000615671 IQCDQ96DY2 449 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 TTC1Q99614 292 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 ZHX2Q9Y6X8 837 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 DPYSL4O14531 572 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 GH2P01242 217 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 PSMD2Q13200 908 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 AFG1LQ8WV93 481 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 GBP5Q96PP8 586 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 UBE3CQ15386 1083 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 PASD1Q8IV76 773 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 SYNDIG1Q9H7V2 258 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 PIDD1Q9HB75 910 aa20.22■□□□□ 0.83
GABPB1-212ENST00000615671 SSTR3P32745 418 aaPredicted RBP20.21■□□□□ 0.83
GABPB1-212ENST00000615671 EPN1Q9Y6I3 576 aaPredicted RBP20.21■□□□□ 0.83
GABPB1-212ENST00000615671 ATP7AQ04656 1500 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 GAP43P17677 238 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 PNMA2Q9UL42 364 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 ZNF233A6NK53 670 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
GABPB1-212ENST00000615671 MTMR6Q9Y217 621 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 SUGT1Q9Y2Z0 365 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 A0A1B0GUA9 196 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 NEMP1O14524 444 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 BBOX1O75936 387 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 ABCB11O95342 1321 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 MSH2P43246 934 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 PLTPP55058 493 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 C10orf76Q5T2E6 689 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 CARMIL3Q8ND23 1372 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 WDR11Q9BZH6 1224 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 RNF181Q9P0P0 153 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms