RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ZBTB21Q9ULJ3 1066 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 FAM86B1E9PN63 330 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 IPO7O95373 1038 aaKnown RBP13.22□□□□□ -0.29
SRRT-213ENST00000611405 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
SRRT-213ENST00000611405 FAM86B2P0C5J1 330 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 HNRNPH3P31942 346 aaKnown RBP13.22□□□□□ -0.29
SRRT-213ENST00000611405 ECE1P42892 770 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 MTMR14Q8NCE2 650 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 ACER1Q8TDN7 264 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
SRRT-213ENST00000611405 CNTNAP1P78357 1384 aa13.21□□□□□ -0.29
SRRT-213ENST00000611405 ABL1P00519 1130 aa13.21□□□□□ -0.29
SRRT-213ENST00000611405 ZNF76P36508 570 aa13.21□□□□□ -0.29
SRRT-213ENST00000611405 CLCN6P51797 869 aa13.21□□□□□ -0.29
SRRT-213ENST00000611405 HERVK_113P62684 666 aa13.21□□□□□ -0.29
SRRT-213ENST00000611405 POTEFA5A3E0 1075 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 TRAF5O00463 557 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 NKRFO15226 690 aaKnown RBP eCLIP13.21□□□□□ -0.3
SRRT-213ENST00000611405 MSH4O15457 936 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 PLA2G6O60733 806 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 POTEIP0CG38 1075 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 HOXA13P31271 388 aaPredicted RBP13.21□□□□□ -0.3
SRRT-213ENST00000611405 ARSHQ5FYA8 562 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 TEX35Q5T0J7 233 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 FAM83BQ5T0W9 1011 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 POTEGQ6S5H5 508 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 POTEEQ6S8J3 1075 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 KIAA1328Q86T90 577 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 SYT2Q8N9I0 419 aaPredicted RBP13.21□□□□□ -0.3
SRRT-213ENST00000611405 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 SH2D4AQ9H788 454 aa13.21□□□□□ -0.3
SRRT-213ENST00000611405 ZNF277Q9NRM2 450 aaPredicted RBP13.21□□□□□ -0.3
SRRT-213ENST00000611405 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 SPATA31C1P0DKV0 1188 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 BMS1Q14692 1282 aaKnown RBP13.2□□□□□ -0.3
SRRT-213ENST00000611405 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 KIAA1755Q5JYT7 1200 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 FAM83AQ86UY5 434 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 AGBL3Q8NEM8 1001 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
SRRT-213ENST00000611405 RANBP17Q9H2T7 1088 aaKnown RBP13.2□□□□□ -0.3
SRRT-213ENST00000611405 ZNF446Q9NWS9 450 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 GUCA1BQ9UMX6 200 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 TMCO3Q6UWJ1 677 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
SRRT-213ENST00000611405 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
SRRT-213ENST00000611405 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 KRT86O43790 486 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 TAL1P17542 331 aaPredicted RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 MARSP56192 900 aaKnown RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 CCDC122Q5T0U0 273 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 ZC3H3Q8IXZ2 948 aaKnown RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 KCTD10Q9H3F6 313 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 VCPKMTQ9H867 229 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 DPEP1P16444 411 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 GIT2Q14161 759 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
SRRT-213ENST00000611405 KCNA3P22001 575 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 FGFBP2Q9BYJ0 223 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
SRRT-213ENST00000611405 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 PSMC6P62333 389 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
SRRT-213ENST00000611405 PABPC4Q13310 644 aaKnown RBP eCLIP13.18□□□□□ -0.35e-7■■□□□ 13.1
SRRT-213ENST00000611405 SPA17Q15506 151 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 CCDC174Q6PII3 467 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
SRRT-213ENST00000611405 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 FAM184BQ9ULE4 1060 aa13.18□□□□□ -0.3
SRRT-213ENST00000611405 MYO6Q9UM54 1294 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms