RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZMYND12Q9H0C1 365 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 DDX41Q9UJV9 622 aaKnown RBP16.01■□□□□ 0.15
RETREG3-208ENST00000589797 PSMD14O00487 310 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 ZBED6P86452 979 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 SHROOM1Q2M3G4 852 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-208ENST00000589797 RAD54LQ92698 747 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 ANKFY1Q9P2R3 1169 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 ADD3Q9UEY8 706 aaKnown RBP16.01■□□□□ 0.15
RETREG3-208ENST00000589797 GOLGA6L10A0A0M3HER8 536 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 IGBP1P78318 339 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 GPR161Q8N6U8 529 aaKnown RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 ATRIPQ8WXE1 791 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 MRRFQ96E11 262 aaKnown RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 KIAA0754O94854 1291 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 KRT19P08727 400 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 RNF187Q5TA31 235 aaPredicted RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 RTKN2Q8IZC4 609 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 UHMK1Q8TAS1 419 aaKnown RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 WRNIP1Q96S55 665 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 ZCCHC17Q9NP64 241 aaKnown RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 PPP1R3GB7ZBB8 358 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 SEPT7Q16181 437 aaKnown RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 UBLCP1Q8WVY7 318 aaPredicted RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 CEP170P1Q96L14 293 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 PANX2Q96RD6 677 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 THAP9Q9H5L6 903 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 MLXIPQ9HAP2 919 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 LRRC53A6NM62 1247 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
RETREG3-208ENST00000589797 BMP6P22004 513 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 VPS41P49754 854 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 KIF11P52732 1056 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 POMGNT1Q8WZA1 660 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 CSADQ9Y600 493 aa16■□□□□ 0.15
RETREG3-208ENST00000589797 PDE4DIPQ5VU43 2346 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 HNRNPDLO14979 420 aaKnown RBP15.99■□□□□ 0.15
RETREG3-208ENST00000589797 PEX3P56589 373 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 GFPT1Q06210 699 aaPredicted RBP15.99■□□□□ 0.15
RETREG3-208ENST00000589797 ADSSL1Q8N142 457 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 RMDN3Q96TC7 470 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 STRN3Q13033 797 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 CFAP58Q5T655 872 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 TRIM58Q8NG06 486 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 CCSER1Q9C0I3 900 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 SEPT9Q9UHD8 586 aaPredicted RBP15.99■□□□□ 0.15
RETREG3-208ENST00000589797 DPEP1P16444 411 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 C2orf54Q08AI8 447 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 NR1I3Q14994 352 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 MAGEF1Q9HAY2 307 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 PARVGQ9HBI0 331 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 GCNT4Q9P109 453 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 PRR12Q9ULL5 1215 aa15.99■□□□□ 0.15
RETREG3-208ENST00000589797 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 NMT1P30419 496 aaKnown RBP15.98■□□□□ 0.15
RETREG3-208ENST00000589797 WDR44Q5JSH3 913 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 GSTA5Q7RTV2 222 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 SULF1Q8IWU6 871 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 PDE11AQ9HCR9 933 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 RIC8AQ9NPQ8 531 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 HYOU1Q9Y4L1 999 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 CD19P15391 556 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 MTERF2Q49AM1 385 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 ZNF384Q8TF68 577 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 PACSIN2Q9UNF0 486 aaPredicted RBP15.98■□□□□ 0.15
RETREG3-208ENST00000589797 SLIT3O75094 1523 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 LDHDQ86WU2 507 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 CERS5Q8N5B7 392 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 NUDT12Q9BQG2 462 aa15.98■□□□□ 0.15
RETREG3-208ENST00000589797 A0A1B0GTH6 734 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 GNA14O95837 355 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 H2AFZP0C0S5 128 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 MARK3P27448 753 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 OSTNP61366 133 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 KCNH2Q12809 1159 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 CFAP221Q4G0U5 840 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 DCAF15Q66K64 600 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 H2AFVQ71UI9 128 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 NACC1Q96RE7 527 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 FZD1Q9UP38 647 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 GYPCP04921 128 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 TRIM49P0CI25 452 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 TRIM49CP0CI26 452 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 RDXP35241 583 aaKnown RBP15.97■□□□□ 0.15
RETREG3-208ENST00000589797 PMS1P54277 932 aaKnown RBP15.97■□□□□ 0.15
RETREG3-208ENST00000589797 TNNC1P63316 161 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 TTC19Q6DKK2 380 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-208ENST00000589797 FBXL16Q8N461 479 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 DCAF4Q8WV16 495 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 CCDC114Q96M63 670 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 DPH5Q9H2P9 285 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 IPO5O00410 1097 aaKnown RBP15.97■□□□□ 0.15
RETREG3-208ENST00000589797 NCK2O43639 380 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 AZI2Q9H6S1 392 aa15.97■□□□□ 0.15
RETREG3-208ENST00000589797 SHTN1A0MZ66 631 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms