RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 USP17L20D6RJB6 530 aa18.9■□□□□ 0.62
VAC14-210ENST00000568548 FAM228BP0C875 321 aa18.9■□□□□ 0.62
VAC14-210ENST00000568548 USP17L24Q0WX57 530 aa18.9■□□□□ 0.62
VAC14-210ENST00000568548 KIAA0753Q2KHM9 967 aa18.9■□□□□ 0.62
VAC14-210ENST00000568548 USP17L6PQ6QN14 398 aa18.9■□□□□ 0.62
VAC14-210ENST00000568548 NOC3LQ8WTT2 800 aaKnown RBP18.9■□□□□ 0.62
VAC14-210ENST00000568548 AP1M1Q9BXS5 423 aa18.9■□□□□ 0.62
VAC14-210ENST00000568548 ANO9A1A5B4 782 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 RIMBP2O15034 1052 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 SEC24CP53992 1094 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 FAM83BQ5T0W9 1011 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 RETREG2Q8NC44 543 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 KIAA1024Q9UPX6 916 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 BCS1LQ9Y276 419 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 MPHOSPH10O00566 681 aaKnown RBP18.89■□□□□ 0.61
VAC14-210ENST00000568548 NDUFAB1O14561 156 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 HSF2BPO75031 334 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 LRRC55Q6ZSA7 311 aa18.89■□□□□ 0.61
VAC14-210ENST00000568548 PDE4CQ08493 712 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 HLTFQ14527 1009 aaKnown RBP eCLIP18.88■□□□□ 0.61
VAC14-210ENST00000568548 KRT79Q5XKE5 535 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 PROM2Q8N271 834 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 GPATCH11Q8N954 259 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 PPM1EQ8WY54 764 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 NOX5Q96PH1 765 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 BCCIPQ9P287 314 aaKnown RBP eCLIP18.88■□□□□ 0.61
VAC14-210ENST00000568548 GPSM2P81274 684 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 NNTQ13423 1086 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 HERC4Q5GLZ8 1057 aaPredicted RBP18.88■□□□□ 0.61
VAC14-210ENST00000568548 HGSNATQ68CP4 663 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
VAC14-210ENST00000568548 MAATS1Q7Z4T9 603 aa18.88■□□□□ 0.61
VAC14-210ENST00000568548 ADAT2Q7Z6V5 191 aaKnown RBP18.88■□□□□ 0.61
VAC14-210ENST00000568548 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
VAC14-210ENST00000568548 POTEB3A0JP26 581 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 SHTN1A0MZ66 631 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 POTECB2RU33 542 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 NOL4O94818 638 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 PRPHP41219 470 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 CRY2Q49AN0 593 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 SPTY2D1Q68D10 685 aaPredicted RBP18.87■□□□□ 0.61
VAC14-210ENST00000568548 PDXDC1Q6P996 788 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 POTEBQ6S5H4 581 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 UNC13DQ70J99 1090 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 TADA2BQ86TJ2 420 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 AK8Q96MA6 479 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 UFL1O94874 794 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 ERLIN2O94905 339 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 AKR1B1P15121 316 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 DDR1Q08345 913 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 MFSD14BQ5SR56 506 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 TSGA10Q9BZW7 698 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 PANK4Q9NVE7 773 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 H0YHG0 523 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 KRT18P05783 430 aaKnown RBP18.87■□□□□ 0.61
VAC14-210ENST00000568548 COASYQ13057 564 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 RNF187Q5TA31 235 aaPredicted RBP18.87■□□□□ 0.61
VAC14-210ENST00000568548 MYOCDQ8IZQ8 938 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 MMGT1Q8N4V1 131 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 RAD54LQ92698 747 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 RPGRIP1Q96KN7 1286 aa18.87■□□□□ 0.61
VAC14-210ENST00000568548 TMCO5BA8MYB1 307 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 KCNK3O14649 394 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
VAC14-210ENST00000568548 GJB7Q6PEY0 223 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 ZNF804AQ7Z570 1209 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 KAT2BQ92831 832 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 RBM17Q96I25 401 aaKnown RBP18.86■□□□□ 0.61
VAC14-210ENST00000568548 MTMR9Q96QG7 549 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 RTFDC1Q9BY42 306 aaPredicted RBP18.86■□□□□ 0.61
VAC14-210ENST00000568548 SFI1A8K8P3 1242 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 ATP2C2O75185 946 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 PDHBP11177 359 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 SLC9A1P19634 815 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 EPS15P42566 896 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 ADCY7P51828 1080 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 CASP5P51878 434 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 SFMBT2Q5VUG0 894 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 TCERG1LQ5VWI1 586 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 NAA35Q5VZE5 725 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 ICE2Q659A1 982 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 DAGLBQ8NCG7 672 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 TRIM31Q9BZY9 425 aa18.86■□□□□ 0.61
VAC14-210ENST00000568548 CCDC88AQ3V6T2 1871 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 ZNF233A6NK53 670 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 LAD1O00515 517 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 RPS6KA5O75582 802 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 PPFIA1Q13136 1202 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 TMEM266Q2M3C6 531 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 SAMD1Q6SPF0 538 aaPredicted RBP18.85■□□□□ 0.61
VAC14-210ENST00000568548 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
VAC14-210ENST00000568548 WDR66Q8TBY9 1149 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 RNPC3Q96LT9 517 aaKnown RBP18.85■□□□□ 0.61
VAC14-210ENST00000568548 USP17L10C9JJH3 530 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 MYL1P05976 194 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 TCP1P17987 556 aaKnown RBP18.85■□□□□ 0.61
VAC14-210ENST00000568548 SCNN1DP51172 638 aa18.85■□□□□ 0.61
VAC14-210ENST00000568548 DCAF17Q5H9S7 520 aaPredicted RBP18.85■□□□□ 0.61
VAC14-210ENST00000568548 CFAP58Q5T655 872 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms