RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RPL11P62913 178 aaKnown RBP4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 PLP2Q04941 152 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 TKFCQ3LXA3 575 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 EGFLAMQ63HQ2 1017 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 LBX2Q6XYB7 198 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 IFNL3Q8IZI9 196 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 CARFQ8N187 725 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 LINC00482Q8N8I6 264 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 SMARCC2Q8TAQ2 1214 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 SLC7A14Q8TBB6 771 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 CLUHP3Q96NS8 147 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 NOX5Q96PH1 765 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 SLC52A2Q9HAB3 445 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 USP40Q9NVE5 1235 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 SPATA6Q9NWH7 488 aaPredicted RBP4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 SFMBT1Q9UHJ3 866 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 JAG2Q9Y219 1238 aa4.73□□□□□ -1.65
SHCBP1-202ENST00000563219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 RAPGEF3O95398 923 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 HSP90B1P14625 803 aaKnown RBP4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 KRTAP10-2P60368 255 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 NFKB2Q00653 900 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 LSAMPQ13449 338 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 KIZQ2M2Z5 673 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 UBXN11Q5T124 520 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 NLRP10Q86W26 655 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 PUS7Q96PZ0 661 aaKnown RBP4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 BDH2Q9BUT1 245 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 CDIP1Q9H305 208 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 TRIM39Q9HCM9 518 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 NDOR1Q9UHB4 597 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 FBXL7Q9UJT9 491 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 PLAAQ9Y263 795 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 SIT1Q9Y3P8 196 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 TRAF6Q9Y4K3 522 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 PCDHA2Q9Y5H9 948 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 CD2APQ9Y5K6 639 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 X6R8D5 127 aa4.72□□□□□ -1.65
SHCBP1-202ENST00000563219 H7BY64 318 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 ARVCFO00192 962 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 WNT9AO14904 365 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 PPM1GO15355 546 aaPredicted RBP4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 ADRB1P08588 477 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 BCL6P41182 706 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 SARSP49591 514 aaKnown RBP4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 EFEMP1Q12805 493 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 PABPC4Q13310 644 aaKnown RBP eCLIP4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 ZNF662Q6ZS27 426 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 BRAPQ7Z569 592 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 FERMT3Q86UX7 667 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 DCP2Q8IU60 420 aaKnown RBP4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 RIOX2Q8IUF8 465 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 NINJ1Q92982 152 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 SCLYQ96I15 445 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 NTMQ9P121 344 aa4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
SHCBP1-202ENST00000563219 SGSM2O43147 1006 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 CLSTN1O94985 981 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 CRTAMO95727 393 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 CYP2C8P10632 490 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 CANXP27824 592 aaKnown RBP4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 SPATS1Q496A3 300 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 DALRD3Q5D0E6 543 aaKnown RBP4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 MROH9Q5TGP6 573 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 TTLL7Q6ZT98 887 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 CEP68Q76N32 757 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 ZBTB8AQ96BR9 441 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 DDX11Q96FC9 970 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 TMEM169Q96HH4 297 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 AP5M1Q9H0R1 490 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 PCDH18Q9HCL0 1135 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 INTS7Q9NVH2 962 aaKnown RBP4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 MARCH2Q9P0N8 246 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 DUSP10Q9Y6W6 482 aa4.7□□□□□ -1.66
SHCBP1-202ENST00000563219 TCRBV16S1A1N1A0A5B0 115 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 ANKRD62A6NC57 917 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 C22orf46C9J442 243 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 DNAJC8O75937 253 aaPredicted RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 SOD2P04179 222 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 C8BP07358 591 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 CDK11BP21127 795 aaKnown RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GRK2P25098 689 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GRK3P35626 688 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GYS2P54840 703 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GJA9P57773 515 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GUCY1A3Q02108 690 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 PAK1Q13153 545 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 SMAD4Q13485 552 aaKnown RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 TAF7LQ5H9L4 462 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 ETV3LQ6ZN32 361 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 FGD2Q7Z6J4 655 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 MTDHQ86UE4 582 aaKnown RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GGNQ86UU5 652 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 ZNF761Q86XN6 746 aaPredicted RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 MIB1Q86YT6 1006 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 TEX2Q8IWB9 1127 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 NIM1KQ8IY84 436 aa4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 DDX1Q92499 740 aaKnown RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 MAGEB10Q96LZ2 347 aaPredicted RBP4.69□□□□□ -1.66
SHCBP1-202ENST00000563219 GORASP1Q9BQQ3 440 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms