RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CDPF1Q6NVV7 123 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 OSTM1Q86WC4 334 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 TMEM130Q8N3G9 435 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 HPS3Q969F9 1004 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 FAM193BQ96PV7 902 aaPredicted RBP4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 ACO2Q99798 780 aaKnown RBP4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 HDAC8Q9BY41 377 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 CSRNP2Q9H175 543 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 CCM2LQ9NUG4 571 aaPredicted RBP4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 PPARGC1AQ9UBK2 798 aaKnown RBP4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 ZNF69Q9UC07 566 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 FBXO9Q9UK97 447 aaPredicted RBP4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 IPPQ9Y573 584 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 PCDHA11Q9Y5I1 949 aa4.42□□□□□ -1.7
AMBRA1-208ENST00000529558 NPHP3-ACAD11A0A0J9YXS1 232 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 DYNC1LI2O43237 492 aaPredicted RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 KRT37O76014 449 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 NFICP08651 508 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 ZKSCAN1P17029 563 aaPredicted RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 PAMP19021 973 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 KIR3DL1P43629 444 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 IREB2P48200 963 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 USP11P51784 963 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 ADKP55263 362 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 JAM2P57087 298 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 RAC1P63000 192 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 LMOD3Q0VAK6 560 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 LSAMPQ13449 338 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 ANGEL2Q5VTE6 544 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 MBLAC2Q68D91 279 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 XRRA1Q6P2D8 792 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 HHIPL2Q6UWX4 724 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 SEZ6L2Q6UXD5 910 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 TTLL7Q6ZT98 887 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 FRMD7Q6ZUT3 714 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 PCGF5Q86SE9 256 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 SKAP1Q86WV1 359 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 TEX2Q8IWB9 1127 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 MIER2Q8N344 545 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 KIAA1958Q8N8K9 716 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 ZBTB34Q8NCN2 500 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 ATXN2LQ8WWM7 1075 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 SSH1Q8WYL5 1049 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 EZH1Q92800 747 aaPredicted RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 TRMT2BQ96GJ1 504 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 TMEM169Q96HH4 297 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 MS4A5Q9H3V2 200 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 FAM204AQ9H8W3 233 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 SMURF1Q9HCE7 757 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 TOMM22Q9NS69 142 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 MAP3K20Q9NYL2 800 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 FNIP2Q9P278 1114 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 SWAP70Q9UH65 585 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 LZTS1Q9Y250 596 aa4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 LAS1LQ9Y4W2 734 aaKnown RBP4.41□□□□□ -1.7
AMBRA1-208ENST00000529558 NBNO60934 754 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ZNF205O95201 554 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ADAMTS2O95450 1211 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 CBX7O95931 251 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 AMY2AP04746 511 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 GSTM1P09488 218 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 SRFP11831 508 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 COL6A1P12109 1028 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 AMY2BP19961 511 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 AGXTP21549 392 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 AMPD1P23109 780 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 PREPP48147 710 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 TM4SF4P48230 202 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 SARSP49591 514 aaKnown RBP4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 IRF9Q00978 393 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 LLGL1Q15334 1064 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 GPR19Q15760 415 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 LONRF1Q17RB8 773 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 CLEC16AQ2KHT3 1053 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ALFQ53S48 1182 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 RTP2Q5QGT7 225 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 SFRP5Q5T4F7 317 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 WDR78Q5VTH9 848 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 LILRA6Q6PI73 481 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 FAM214BQ7L5A3 538 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ZNF354CQ86Y25 554 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 NPAS3Q8IXF0 933 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 AGGF1Q8N302 714 aaeCLIP4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 TOP6BLQ8N6T0 577 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 FAM156AQ8NDB6 213 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ACRBPQ8NEB7 543 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 DIS3LQ8TF46 1054 aaKnown RBP4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 TGFBRAP1Q8WUH2 860 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 TCTN2Q96GX1 697 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 SCLT1Q96NL6 688 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ACAP3Q96P50 834 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 KCNJ15Q99712 375 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 DUSP23Q9BVJ7 150 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 GTPBP4Q9BZE4 634 aaKnown RBP4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 GPR62Q9BZJ7 368 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 ZNF277Q9NRM2 450 aaPredicted RBP4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 NXF1Q9UBU9 619 aaKnown RBP4.4□□□□□ -1.71
AMBRA1-208ENST00000529558 GTF2A1LQ9UNN4 478 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms