RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 DEFB132Q7Z7B7 95 aa11.19□□□□□ -0.62
MCF2-209ENST00000520602 C4orf32Q8N8J7 132 aa11.19□□□□□ -0.62
MCF2-209ENST00000520602 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
MCF2-209ENST00000520602 HDAC6Q9UBN7 1215 aa11.19□□□□□ -0.62
MCF2-209ENST00000520602 NID2Q14112 1375 aa11.19□□□□□ -0.62
MCF2-209ENST00000520602 BAZ2AQ9UIF9 1905 aaKnown RBP11.19□□□□□ -0.62
MCF2-209ENST00000520602 ASNSP08243 561 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 EIF2AK2P19525 551 aaKnown RBP11.18□□□□□ -0.62
MCF2-209ENST00000520602 SSR1P43307 286 aaKnown RBP11.18□□□□□ -0.62
MCF2-209ENST00000520602 EXOC3L4Q17RC7 722 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 KIAA0753Q2KHM9 967 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 ODF2Q5BJF6 829 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 TTI2Q6NXR4 508 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 PROM2Q8N271 834 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 FAM133AQ8N9E0 248 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 LRRN4CLQ8ND94 238 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 IFT81Q8WYA0 676 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 FBXO28Q9NVF7 368 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 MYH14Q7Z406 1995 aaKnown RBP11.18□□□□□ -0.62
MCF2-209ENST00000520602 LRRC53A6NM62 1247 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 KIF11P52732 1056 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 SPATA20Q8TB22 786 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 ZNF70Q9UC06 446 aaPredicted RBP11.18□□□□□ -0.62
MCF2-209ENST00000520602 HERC5Q9UII4 1024 aaKnown RBP11.18□□□□□ -0.62
MCF2-209ENST00000520602 CAPN11Q9UMQ6 739 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 ENTPD3O75355 529 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 MOCS3O95396 460 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 ERVK-24P63145 666 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 TBX2Q13207 712 aaPredicted RBP11.18□□□□□ -0.62
MCF2-209ENST00000520602 HDXQ7Z353 690 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 TRIM58Q8NG06 486 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 ANKRD7Q92527 254 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 SH2D3AQ9BRG2 576 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 VPS18Q9P253 973 aa11.18□□□□□ -0.62
MCF2-209ENST00000520602 A0A1W2PQC6 194 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 TMEM110-MUSTN1A8MSY1 372 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 PPP4R3AQ6IN85 833 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 DYDC2Q96IM9 177 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 FAM20AQ96MK3 541 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 MED15Q96RN5 788 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 ADAMTS1Q9UHI8 967 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
MCF2-209ENST00000520602 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 K7ENM7 598 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 DPEP1P16444 411 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
MCF2-209ENST00000520602 IFI16Q16666 785 aaKnown RBP11.17□□□□□ -0.62
MCF2-209ENST00000520602 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
MCF2-209ENST00000520602 KCNK18Q7Z418 384 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 ITIH6Q6UXX5 1313 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 TUBB4BP68371 445 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 XKR9Q5GH70 373 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 GBP6Q6ZN66 633 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 CCDC170Q8IYT3 715 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 IQCDQ96DY2 449 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 PNMA5Q96PV4 448 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
MCF2-209ENST00000520602 SEMA6BQ9H3T3 888 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 PCIF1Q9H4Z3 704 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
MCF2-209ENST00000520602 PIM2Q9P1W9 311 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 MYO1AQ9UBC5 1043 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 PCDHA13Q9Y5I0 950 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 ABCB11O95342 1321 aa11.17□□□□□ -0.62
MCF2-209ENST00000520602 A0A0U1RQJ8 604 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 CCDC172P0C7W6 258 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 FAM102BQ5T8I3 360 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 CYP2W1Q8TAV3 490 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 TRERF1Q96PN7 1200 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 MRFAP1Q9Y605 127 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 PLSCR1O15162 318 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 TADA3O75528 432 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 ABCB4P21439 1286 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 HDLBPQ00341 1268 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 TRIM65Q6PJ69 517 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 NLRX1Q86UT6 975 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 LDHDQ86WU2 507 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 KIAA0895Q8NCT3 520 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 U2AF1L4Q8WU68 220 aaKnown RBP11.16□□□□□ -0.62
MCF2-209ENST00000520602 NACC1Q96RE7 527 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 TAOK3Q9H2K8 898 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
MCF2-209ENST00000520602 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms