RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 EPHB6O15197 1021 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CYP3A4P08684 503 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 ERCC3P19447 782 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 RPA1P27694 616 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 PSMC6P62333 389 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 HERVK_113P62684 666 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 FKBP3Q00688 224 aaKnown RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 ZYXQ15942 572 aaKnown RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 KIF4BQ2VIQ3 1234 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 ARSHQ5FYA8 562 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 HERC4Q5GLZ8 1057 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 FKBP1CQ5VVH2 108 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CCDC174Q6PII3 467 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 MIGA2Q7L4E1 593 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 NELFCDQ8IXH7 590 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 NIM1KQ8IY84 436 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 IQCDQ96DY2 449 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 MYO1AQ9UBC5 1043 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 TRIM10Q9UDY6 481 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 DDX41Q9UJV9 622 aaKnown RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 VAV3Q9UKW4 847 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 TRAF5O00463 557 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CFBP00751 764 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 KRT18P05783 430 aaKnown RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CYLC1P35663 651 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 ZNF76P36508 570 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CLCN6P51797 869 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 PABPC4Q13310 644 aaKnown RBP eCLIP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 TEX35Q5T0J7 233 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 RSRC2Q7L4I2 434 aaKnown RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 VCPKMTQ9H867 229 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 NHEJ1Q9H9Q4 299 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 FAM207AQ9NSI2 230 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-211ENST00000514439 CDC23Q9UJX2 597 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 GUCA1BQ9UMX6 200 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 COL4A3BPQ9Y5P4 624 aa9.09□□□□□ -0.95
CPNE4-211ENST00000514439 IGLV3-22A0A075B6J6 115 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 TBC1D12O60347 775 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 KRT83P78385 493 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CYP4A11Q02928 519 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 TRAF1Q13077 416 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 DEFB132Q7Z7B7 95 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 FAM83AQ86UY5 434 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 SYT2Q8N9I0 419 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CHURC1Q8WUH1 139 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 SCFD1Q8WVM8 642 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 TBC1D5Q92609 795 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 NAPGQ99747 312 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 GLIS2Q9BZE0 524 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 EPC1Q9H2F5 836 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 RANBP17Q9H2T7 1088 aaKnown RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 KCTD10Q9H3F6 313 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 HAUS4Q9H6D7 363 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 ZNF446Q9NWS9 450 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 OGFRQ9NZT2 677 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 TFR2Q9UP52 801 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 DNM3Q9UQ16 869 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 EML1O00423 815 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 HNRNPH3P31942 346 aaKnown RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CAP2P40123 477 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CDK17Q00537 523 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 GIT2Q14161 759 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CCDC40Q4G0X9 1142 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CCDC170Q8IYT3 715 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 GOLGA1Q92805 767 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 ZBED3Q96IU2 234 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-211ENST00000514439 CEP63Q96MT8 703 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 REEP2Q9BRK0 252 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 WDR18Q9BV38 432 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 VPS33BQ9H267 617 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 MMRN2Q9H8L6 949 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 PGAP2Q9UHJ9 254 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 PLAGL2Q9UPG8 496 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
CPNE4-211ENST00000514439 EIF3CLB5ME19 914 aaKnown RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 GCOM1H8Y6P7 765 aaPredicted RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 KIF20AO95235 890 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 TFRCP02786 760 aaKnown RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 POLR2MP0CAP2 368 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 BAG6P46379 1132 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 CASP5P51878 434 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 CHMP4BP1P59074 171 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 CXCL9Q07325 125 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 TUBB2AQ13885 445 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 NBPF9Q3BBW0 867 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 CCDC122Q5T0U0 273 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 SRGAP1Q7Z6B7 1085 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 KIAA1328Q86T90 577 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 FAM160B2Q86V87 743 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 TEX2Q8IWB9 1127 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 SMCR8Q8TEV9 937 aaPredicted RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 EIF3CQ99613 913 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms