RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 MYSM1Q5VVJ2 828 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 FIBCD1Q8N539 461 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
RNF4-218ENST00000513284 CLP1Q92989 425 aaKnown RBP13.15□□□□□ -0.3
RNF4-218ENST00000513284 IWS1Q96ST2 819 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 RNPEPQ9H4A4 650 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
RNF4-218ENST00000513284 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
RNF4-218ENST00000513284 ORC4O43929 436 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 SORBS3O60504 671 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 EIF3JO75822 258 aaKnown RBP13.14□□□□□ -0.31
RNF4-218ENST00000513284 PDGFBP01127 241 aaPredicted RBP13.14□□□□□ -0.31
RNF4-218ENST00000513284 SIGLEC14Q08ET2 396 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
RNF4-218ENST00000513284 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
RNF4-218ENST00000513284 RMDN3Q96TC7 470 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
RNF4-218ENST00000513284 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
RNF4-218ENST00000513284 CSPG5O95196 566 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 GLP2RO95838 553 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 MMP1P03956 469 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 NR3C2P08235 984 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 COASYQ13057 564 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
RNF4-218ENST00000513284 SPPL3Q8TCT6 385 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
RNF4-218ENST00000513284 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
RNF4-218ENST00000513284 C17orf102A2RUQ5 167 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 ENPP3O14638 875 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 CTSHP09668 335 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 EIF2AK2P19525 551 aaKnown RBP13.12□□□□□ -0.31
RNF4-218ENST00000513284 EFHBQ8N7U6 833 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 SPATA33Q96N06 139 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 DDX19BQ9UMR2 479 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 USP15Q9Y4E8 981 aaPredicted RBP13.12□□□□□ -0.31
RNF4-218ENST00000513284 PCDHGC5Q9Y5F6 944 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 MRVI1Q9Y6F6 885 aa13.12□□□□□ -0.31
RNF4-218ENST00000513284 PRR23AA6NEV1 266 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 OPLAHO14841 1288 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 CHRNA1P02708 482 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 ITGB1P05556 798 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 NDUFV1P49821 464 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 ADAM17P78536 824 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
RNF4-218ENST00000513284 CRIPAKQ8N1N5 446 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
RNF4-218ENST00000513284 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
RNF4-218ENST00000513284 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 PHF7Q9BWX1 381 aaPredicted RBP13.11□□□□□ -0.31
RNF4-218ENST00000513284 MAF1Q9H063 256 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 IRF2BPLQ9H1B7 796 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 SETD4Q9NVD3 440 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
RNF4-218ENST00000513284 ADGRA3Q8IWK6 1321 aa13.11□□□□□ -0.31
RNF4-218ENST00000513284 H3BRB1 525 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 DGKIO75912 1065 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 ICAM3P32942 547 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 NBL1P41271 181 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 ERMP1Q7Z2K6 904 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 RBM23Q86U06 439 aaKnown RBP13.1□□□□□ -0.31
RNF4-218ENST00000513284 RTN4RL1Q86UN2 441 aaPredicted RBP13.1□□□□□ -0.31
RNF4-218ENST00000513284 PI4K2BQ8TCG2 481 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 SUSD6Q92537 303 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 APBB2Q92870 758 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 RIPOR3Q96MK2 946 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 TTC14Q96N46 770 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
RNF4-218ENST00000513284 EHMT1Q9H9B1 1298 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 BARX2Q9UMQ3 279 aaPredicted RBP13.1□□□□□ -0.31
RNF4-218ENST00000513284 TELO2Q9Y4R8 837 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
RNF4-218ENST00000513284 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
RNF4-218ENST00000513284 CAND2O75155 1236 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 GGPS1O95749 300 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 FGAP02671 866 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 NRIP1P48552 1158 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 ALX1Q15699 326 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
RNF4-218ENST00000513284 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
RNF4-218ENST00000513284 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 ADGRF4Q8IZF3 695 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 ATP8B4Q8TF62 1192 aa13.09□□□□□ -0.31
RNF4-218ENST00000513284 P2RX5Q93086 422 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms