RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 REXO1L1PQ8IX06 675 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 ULK2Q8IYT8 1036 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 ARHGEF39Q8N4T4 335 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 RBBP8NLQ8NC74 664 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 AJUBAQ96IF1 538 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 HAUS7Q99871 368 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 BCL11AQ9H165 835 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 RIOX1Q9H6W3 641 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 ADAMTS1Q9UHI8 967 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 X6R8D5 127 aa3.72□□□□□ -1.81
HMGB3P17-201ENST00000504195 HGSO14964 777 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 RAD17O75943 681 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 PDIA4P13667 645 aaKnown RBP3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 CD38P28907 300 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 LAIR1Q6GTX8 287 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 TEX2Q8IWB9 1127 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 CRACR2BQ8N4Y2 399 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 ADCY4Q8NFM4 1077 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 COPS5Q92905 334 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 MSL2Q9HCI7 577 aa3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 CGGBP1Q9UFW8 167 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 COA3Q9Y2R0 106 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P17-201ENST00000504195 KLHL18O94889 574 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 RPL11P62913 178 aaKnown RBP3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 Q8N1Y9 231 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 DPF3Q92784 378 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 NEIL1Q96FI4 390 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 TRMT2BQ96GJ1 504 aaKnown RBP3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 FERD3LQ96RJ6 166 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 KLHL25Q9H0H3 589 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 FAM86C1Q9NVL1 165 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 ZNHIT2Q9UHR6 403 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 GGT7Q9UJ14 662 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 TIMM13Q9Y5L4 95 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 SLC30A1Q9Y6M5 507 aa3.7□□□□□ -1.82
HMGB3P17-201ENST00000504195 IKBKBO14920 756 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 COL6A1P12109 1028 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 PLS3P13797 630 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 ZNF37AP17032 561 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 KRT4P19013 534 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 RAC3P60763 192 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 TAGLNQ01995 201 aaKnown RBP3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 SMAD2Q15796 467 aaKnown RBP3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 GNPTABQ3T906 1256 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 POMZP3Q6PJE2 187 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 MAMDC4Q6UXC1 1216 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 NUDT10Q8NFP7 164 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 NUDT11Q96G61 164 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 ZNF703Q9H7S9 590 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 PHAXQ9H814 394 aaKnown RBP3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 BTG4Q9NY30 223 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 CLEC1BQ9P126 229 aa3.69□□□□□ -1.82
HMGB3P17-201ENST00000504195 MYO1BO43795 1136 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 MAFKO60675 156 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 RHOBTB3O94955 611 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 PEX11BO96011 259 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 LRG1P02750 347 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 CSF2RBP32927 897 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 ZYXQ15942 572 aaKnown RBP3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 GPR162Q16538 588 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 CCDC27Q2M243 656 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 ZNF326Q5BKZ1 582 aaKnown RBP3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 EMC4Q5J8M3 183 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 E4F1Q66K89 784 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 Q6ZSN1 163 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 MICALCLQ6ZW33 695 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 CEP68Q76N32 757 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 GPR155Q7Z3F1 870 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 PRIMA1Q86XR5 153 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 KIAA0825Q8IV33 1275 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 PHOSPHO1Q8TCT1 267 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 KATNBL1Q9H079 304 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 PARPBPQ9NWS1 579 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 SUGT1Q9Y2Z0 365 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 PCDHB4Q9Y5E5 795 aa3.68□□□□□ -1.82
HMGB3P17-201ENST00000504195 TCRBV5S2A0A599 114 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 H7BY64 318 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 TADA3O75528 432 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 LMNAP02545 664 aaKnown RBP3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 CR2P20023 1033 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 HIBADHP31937 336 aaKnown RBP3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 SLC7A5Q01650 507 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 USP10Q14694 798 aaKnown RBP3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 ARRDC4Q8NCT1 418 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 TMEM169Q96HH4 297 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 OR14A2Q96R54 314 aa3.67□□□□□ -1.82
HMGB3P17-201ENST00000504195 FBXO21O94952 628 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 EPHX1P07099 455 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 FPR2P25090 351 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 RPS19P39019 145 aaKnown RBP3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 SCRN1Q12765 414 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 STEAP3Q658P3 488 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 MBLAC2Q68D91 279 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 VASNQ6EMK4 673 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 CYP4F22Q6NT55 531 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 TRIM48Q8IWZ4 208 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 ZNF808Q8N4W9 903 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 SPON2Q9BUD6 331 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 BCL2L13Q9BXK5 485 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms