RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GYPCP04921 128 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 CASP14P31944 242 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 ETNPPLQ8TBG4 499 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
USP46-204ENST00000503060 JDP2Q8WYK2 163 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 CCDC51Q96ER9 411 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 SH2D4AQ9H788 454 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 MYOZ2Q9NPC6 264 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
USP46-204ENST00000503060 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 LGALS16A8MUM7 142 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 TBX3O15119 743 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 TPM1P09493 284 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
USP46-204ENST00000503060 UBXN1Q04323 297 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 DMTNQ08495 405 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 PRR16Q569H4 304 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 DDX12PQ92771 950 aa12.87□□□□□ -0.35
USP46-204ENST00000503060 NAA15Q9BXJ9 866 aaKnown RBP12.87□□□□□ -0.35
USP46-204ENST00000503060 RBM47A0AV96 593 aaKnown RBP12.86□□□□□ -0.35
USP46-204ENST00000503060 PLA2G6O60733 806 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
USP46-204ENST00000503060 CIITAP33076 1130 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP46-204ENST00000503060 TRIM14Q14142 442 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 SYT10Q6XYQ8 523 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 UBXN4Q92575 508 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 LENG9Q96B70 501 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
USP46-204ENST00000503060 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 FER1L6Q2WGJ9 1857 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 FAM86B1E9PN63 330 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 NFKBIEO00221 500 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 FAM86B2P0C5J1 330 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 IDEP14735 1019 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 STAT3P40763 770 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 EHHADHQ08426 723 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 PSMD2Q13200 908 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 TNIP1Q15025 636 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
USP46-204ENST00000503060 MB21D1Q8N884 522 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 DNAJC19Q96DA6 116 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 PAIP2Q9BPZ3 127 aaKnown RBP12.86□□□□□ -0.35
USP46-204ENST00000503060 FBXO9Q9UK97 447 aaPredicted RBP12.86□□□□□ -0.35
USP46-204ENST00000503060 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
USP46-204ENST00000503060 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 POTEB3A0JP26 581 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 POTECB2RU33 542 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 ZMYND10O75800 440 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 CYP3A4P08684 503 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 FECHP22830 423 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 ETF1P62495 437 aaKnown RBP12.85□□□□□ -0.35
USP46-204ENST00000503060 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
USP46-204ENST00000503060 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 TRIM65Q6PJ69 517 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 POTEBQ6S5H4 581 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 FAM160B2Q86V87 743 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
USP46-204ENST00000503060 FAM20AQ96MK3 541 aa12.85□□□□□ -0.35
USP46-204ENST00000503060 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
USP46-204ENST00000503060 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 E9PMD0 336 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 MED24O75448 989 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 ASNSP08243 561 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 PLA2G4BP0C869 781 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 ZNF280AP59817 542 aaPredicted RBP12.84□□□□□ -0.35
USP46-204ENST00000503060 RASA3Q14644 834 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 MTF1Q14872 753 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 C4orf46Q504U0 113 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
USP46-204ENST00000503060 CTDP1Q9Y5B0 961 aaPredicted RBP12.84□□□□□ -0.35
USP46-204ENST00000503060 BRCA1P38398 1863 aaKnown RBP12.84□□□□□ -0.35
USP46-204ENST00000503060 SSBP05455 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP46-204ENST00000503060 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 CCDC84Q86UT8 332 aaPredicted RBP12.84□□□□□ -0.35
USP46-204ENST00000503060 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 TUBGCP2Q9BSJ2 902 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 PHLPP2Q6ZVD8 1323 aa12.84□□□□□ -0.35
USP46-204ENST00000503060 GCOM1H8Y6P7 765 aaPredicted RBP12.83□□□□□ -0.35
USP46-204ENST00000503060 RNF225M0QZC1 329 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms