RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 JAM3Q9BX67 310 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 GPR62Q9BZJ7 368 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 MAF1Q9H063 256 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 PPCSQ9HAB8 311 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 DNM3Q9UQ16 869 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 SPO11Q9Y5K1 396 aa9.34□□□□□ -0.91
GAPVD1-217ENST00000479511 FAM181BA6NEQ2 426 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 WASH4PA8MWX3 477 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 KCNK3O14649 394 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 SYPP08247 313 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 ZNF865P0CJ78 1059 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 BMP3P12645 472 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 PHKG2P15735 406 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 MAP4P27816 1152 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 BCL6P41182 706 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 PHC1P78364 1004 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 ACAP2Q15057 778 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 CLUL1Q15846 466 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 GRAMD1BQ3KR37 738 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 C22orf34Q6ZV56 151 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 KIAA1958Q8N8K9 716 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 SLC35G2Q8TBE7 412 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 SCYL1Q96KG9 808 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 MAN1C1Q9NR34 630 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 CCM2LQ9NUG4 571 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 INVSQ9Y283 1065 aa9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 NOC2LQ9Y3T9 749 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-217ENST00000479511 FAM95CA0A1B0GW59 222 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 SLC12A8A0AV02 714 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 A6NNZ2 444 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 PMM2O15305 246 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 FGF10O15520 208 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 AP1G1O43747 822 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 HSPA6P17066 643 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 KRT15P19012 456 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 VCAM1P19320 739 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 LSP1P33241 339 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 USP14P54578 494 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 LSAMPQ13449 338 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 ZNF267Q14586 743 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 FAM83BQ5T0W9 1011 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 IFIT1BQ5T764 474 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 ANGEL2Q5VTE6 544 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 PIWIL2Q8TC59 973 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 TGFBRAP1Q8WUH2 860 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 JADE3Q92613 823 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 DPF3Q92784 378 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 CHAMP1Q96JM3 812 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 PTCHD1Q96NR3 888 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 TAAR9Q96RI9 348 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 ELAC2Q9BQ52 826 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 ZDHHC5Q9C0B5 715 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 NMRK2Q9NPI5 230 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 AP5S1Q9NUS5 200 aa9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 GNL3LQ9NVN8 582 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-217ENST00000479511 TCRBV5S4A2TA0A5A2 114 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 MYBP10242 640 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 NOS3P29474 1203 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 ZNF280AP59817 542 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 IRF9Q00978 393 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 NFKBIBQ15653 356 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 INO80DQ53TQ3 878 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 NLRP10Q86W26 655 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 AMOTL1Q8IY63 956 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 ARMC10Q8N2F6 343 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 ZNF610Q8N9Z0 462 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 NEDD1Q8NHV4 660 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 PARD3BQ8TEW8 1205 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 ZMAT4Q9H898 229 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 TOMM22Q9NS69 142 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 CLDND1Q9NY35 253 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 PUF60Q9UHX1 559 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 PNMA2Q9UL42 364 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 PHTF1Q9UMS5 762 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 PTPN22Q9Y2R2 807 aa9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 TIMM13Q9Y5L4 95 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-217ENST00000479511 BAZ1BQ9UIG0 1483 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 FGAP02671 866 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 LAPTM5Q13571 262 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 TICAM2Q86XR7 235 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 MFSD4AQ8N468 514 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 LINC00116Q8NCU8 138 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 PANK1Q8TE04 598 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 TTC17Q96AE7 1141 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 MYRFLQ96LU7 910 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 FOXP3Q9BZS1 431 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 C1orf112Q9NSG2 853 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 USP21Q9UK80 565 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 ZNF281Q9Y2X9 895 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 PCDHA11Q9Y5I1 949 aa9.3□□□□□ -0.92
GAPVD1-217ENST00000479511 TRBV23OR9-2A0A075B6M9 112 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 C7orf72A4D263 438 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 RASSF10A6NK89 507 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 GNB5O14775 395 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 MYO1BO43795 1136 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 FKTNO75072 461 aa9.29□□□□□ -0.92
GAPVD1-217ENST00000479511 COL6A2P12110 1019 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms