RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 A0A0U1RQJ8 604 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 PSMD10O75832 226 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 KLK7P49862 253 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 HSD17B4P51659 736 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 PABPC4Q13310 644 aaKnown RBP eCLIP11.31□□□□□ -0.6
MSH5-211ENST00000463144 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 LRRC55Q6ZSA7 311 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
MSH5-211ENST00000463144 ATRIPQ8WXE1 791 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 SLC5A5Q92911 643 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 EIF2AK1Q9BQI3 630 aaKnown RBP11.31□□□□□ -0.6
MSH5-211ENST00000463144 SLF1Q9BQI6 1058 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
MSH5-211ENST00000463144 MRPL44Q9H9J2 332 aaKnown RBP11.31□□□□□ -0.6
MSH5-211ENST00000463144 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
MSH5-211ENST00000463144 CCPG1Q9ULG6 757 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
MSH5-211ENST00000463144 PES1O00541 588 aaKnown RBP11.3□□□□□ -0.6
MSH5-211ENST00000463144 NFIBO00712 420 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 ARP10275 920 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
MSH5-211ENST00000463144 KRT9P35527 623 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
MSH5-211ENST00000463144 CYP4A11Q02928 519 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 LRRC63Q05C16 580 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 TBC1D8BQ0IIM8 1120 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 TRIM14Q14142 442 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 GIT2Q14161 759 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 FAM114A1Q8IWE2 563 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 ERMNQ8TAM6 284 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 LPAR1Q92633 364 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 HOOK2Q96ED9 719 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
MSH5-211ENST00000463144 BCAS3Q9H6U6 928 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 DNM3Q9UQ16 869 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 DOCK1Q14185 1865 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 SLITRK3O94933 977 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 TUBB4AP04350 444 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 TPM1P09493 284 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
MSH5-211ENST00000463144 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
MSH5-211ENST00000463144 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 TTYH3Q9C0H2 523 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 ZNF112Q9UJU3 913 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 PARP14Q460N5 1801 aa11.3□□□□□ -0.6
MSH5-211ENST00000463144 VCAM1P19320 739 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 MTMR2Q13614 643 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 SYCP1Q15431 976 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 ANGEL2Q5VTE6 544 aaKnown RBP11.29□□□□□ -0.6
MSH5-211ENST00000463144 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 CPXCR1Q8N123 301 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 SCFD1Q8WVM8 642 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 ZKSCAN4Q969J2 545 aaPredicted RBP11.29□□□□□ -0.6
MSH5-211ENST00000463144 CHP1Q99653 195 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 SLC38A10Q9HBR0 1119 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 RAVER2Q9HCJ3 691 aaKnown RBP11.29□□□□□ -0.6
MSH5-211ENST00000463144 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 RPTORQ8N122 1335 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 ZBTB39O15060 712 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 CASP5P51878 434 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 GHRHRQ02643 423 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 SPP2Q13103 211 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
MSH5-211ENST00000463144 B3GNT9Q6UX72 402 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 TMTC1Q8IUR5 882 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 DYDC2Q96IM9 177 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 ERGIC2Q96RQ1 377 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 RUSC1Q9BVN2 902 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
MSH5-211ENST00000463144 RSPH10B2B2RC85 870 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 CHMP2AO43633 222 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 KRT18P05783 430 aaKnown RBP11.28□□□□□ -0.6
MSH5-211ENST00000463144 CCDC175P0C221 793 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 RSPH10BP0C881 870 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 ALAS1P13196 640 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 ITGB5P18084 799 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
MSH5-211ENST00000463144 WDR59Q6PJI9 974 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms