RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 PSMC4P43686 418 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 ADCK5Q3MIX3 580 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 IFT20Q8IY31 132 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 MSTO1Q9BUK6 570 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 SPDYE16A6NNV3 312 aaPredicted RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 MEIS1O00470 390 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 MUM1L1Q5H9M0 696 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 ARL6IP4Q66PJ3 421 aaKnown RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 OR8K1Q8NGG5 319 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 F5H6K3 240 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 WDR46O15213 610 aaKnown RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 KLRC3Q07444 240 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 COG2Q14746 738 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 CEP95Q96GE4 821 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 PSMD14O00487 310 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 CIITAP33076 1130 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 HUNKP57058 714 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 POLR2FP61218 127 aaKnown RBP17.04■□□□□ 0.32
NEDD4-202ENST00000435532 CFAP221Q4G0U5 840 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 DAAM2Q86T65 1068 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 NME8Q8N427 588 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 PPP1R16BQ96T49 567 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 HMGCS2P54868 508 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 ZNF449Q6P9G9 518 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 ZKSCAN5Q9Y2L8 839 aa17.04■□□□□ 0.32
NEDD4-202ENST00000435532 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 PPP2R5EQ16537 467 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 SIX6OS1Q8N1H7 587 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 PPP2R3CQ969Q6 453 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 CACYBPQ9HB71 228 aaKnown RBP17.03■□□□□ 0.32
NEDD4-202ENST00000435532 KATNAL1Q9BW62 490 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 FAM196BA6NMK8 535 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
NEDD4-202ENST00000435532 RNF139Q8WU17 664 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 FAM20AQ96MK3 541 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 SPATA33Q96N06 139 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 BFSP1Q12934 665 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 TIGD1Q96MW7 591 aa17.03■□□□□ 0.32
NEDD4-202ENST00000435532 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
NEDD4-202ENST00000435532 RHOXF2BP0C7M4 288 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 CTTNQ14247 550 aaKnown RBP17.02■□□□□ 0.32
NEDD4-202ENST00000435532 RHOXF2Q9BQY4 288 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.32
NEDD4-202ENST00000435532 PNPLA7Q6ZV29 1317 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 SRGAP2BP0DMP2 458 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 ABCB4P21439 1286 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 NFKBIAP25963 317 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 RNASE9P60153 205 aaKnown RBP17.02■□□□□ 0.32
NEDD4-202ENST00000435532 MTMR2Q13614 643 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 LONRF2Q1L5Z9 754 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 FBXO41Q8TF61 875 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 FAM151AQ8WW52 585 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
NEDD4-202ENST00000435532 ITPK1Q13572 414 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 TWF2Q6IBS0 349 aaKnown RBP17.02■□□□□ 0.31
NEDD4-202ENST00000435532 RASEFQ8IZ41 740 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 MTRQ99707 1265 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 SYNJ2BP-COX16A0A087WUM0 186 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 ERICH4A6NGS2 130 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 CSPG5O95196 566 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 NKX1-1Q15270 411 aaPredicted RBP17.02■□□□□ 0.31
NEDD4-202ENST00000435532 MAPK6Q16659 721 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 P2RX5Q93086 422 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 CNOT6LQ96LI5 555 aaKnown RBP17.02■□□□□ 0.31
NEDD4-202ENST00000435532 COX16Q9P0S2 106 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 SEPT10Q9P0V9 454 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 DAGLAQ9Y4D2 1042 aa17.02■□□□□ 0.31
NEDD4-202ENST00000435532 EIF3CLB5ME19 914 aaKnown RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 ORC4O43929 436 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 EIF3CQ99613 913 aaKnown RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 GADD45BO75293 160 aaPredicted RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 CDC42EP1Q00587 391 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 C1orf228Q6PIY5 440 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 OR6J1Q8NGC5 347 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 RAB17Q9H0T7 212 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PFDN4Q9NQP4 134 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 SLC25A27O95847 323 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 NEDD1Q8NHV4 660 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PRPF31Q8WWY3 499 aaKnown RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 FAM149B1Q96BN6 582 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PRDM5Q9NQX1 630 aaPredicted RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 STK36Q9NRP7 1315 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PLEKHA8P1O95397 391 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 NTSR2O95665 410 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 KCNJ6P48051 423 aa17.01■□□□□ 0.31
NEDD4-202ENST00000435532 MCM6Q14566 821 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms