RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 FAM228BP0C875 321 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
TRIM13-204ENST00000420995 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
TRIM13-204ENST00000420995 RAPGEF1Q13905 1077 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
TRIM13-204ENST00000420995 IQCKQ8N0W5 287 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 CASKIN2Q8WXE0 1202 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 PIK3R5Q8WYR1 880 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 DNAJC19Q96DA6 116 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 ESYT2A0FGR8 921 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 ADCY7P51828 1080 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 GSTO1P78417 241 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 GUCY1A3Q02108 690 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 PAK2Q13177 524 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 ORC2Q13416 577 aaPredicted RBP17.5■□□□□ 0.39
TRIM13-204ENST00000420995 NAB2Q15742 525 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 UBE2SQ16763 222 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 TMEM119Q4V9L6 283 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 RNPC3Q96LT9 517 aaKnown RBP17.5■□□□□ 0.39
TRIM13-204ENST00000420995 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 ADAMTS1Q9UHI8 967 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
TRIM13-204ENST00000420995 EIF6P56537 245 aaKnown RBP17.49■□□□□ 0.39
TRIM13-204ENST00000420995 KIAA0753Q2KHM9 967 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 CLEC10AQ8IUN9 316 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
TRIM13-204ENST00000420995 INPP4AQ96PE3 977 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-204ENST00000420995 RAB34Q9BZG1 259 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 EDEM3Q9BZQ6 932 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 NAV1Q8NEY1 1877 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 PDHBP11177 359 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 GTF2A1P52655 376 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-204ENST00000420995 PTPROQ16827 1216 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 FAM26FQ5R3K3 315 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 PROM2Q8N271 834 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 GOLPH3Q9H4A6 298 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 RIOX1Q9H6W3 641 aa17.49■□□□□ 0.39
TRIM13-204ENST00000420995 SLC18A3Q16572 532 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 MEI1Q5TIA1 1274 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 FBXW10Q5XX13 1052 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 DNAAF5Q86Y56 855 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 KLHL7Q8IXQ5 586 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 PANK4Q9NVE7 773 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 PCDHGC5Q9Y5F6 944 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 NPHP3-ACAD11A0A0J9YXS1 232 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 RAD51CO43502 376 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 PPARDQ03181 441 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 PSMD2Q13200 908 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 PDIA5Q14554 519 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 RNF14Q9UBS8 474 aa17.48■□□□□ 0.39
TRIM13-204ENST00000420995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRIM13-204ENST00000420995 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
TRIM13-204ENST00000420995 GRID2IPA4D2P6 1211 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 HAS1Q92839 578 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 INPP5BP32019 993 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 LSP1P33241 339 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 KLHL30Q0D2K2 578 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 TRIM59Q8IWR1 403 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 SYN2Q92777 582 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-204ENST00000420995 GPCPD1Q9NPB8 672 aa17.47■□□□□ 0.39
TRIM13-204ENST00000420995 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
TRIM13-204ENST00000420995 E9PMD0 336 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 KDM7AQ6ZMT4 941 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 NUCKS1Q9H1E3 243 aaKnown RBP17.46■□□□□ 0.39
TRIM13-204ENST00000420995 NARFQ9UHQ1 456 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 LDHCP07864 332 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 NR1D1P20393 614 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
TRIM13-204ENST00000420995 LUC7LQ9NQ29 371 aaKnown RBP17.46■□□□□ 0.39
TRIM13-204ENST00000420995 ACTN1P12814 892 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-204ENST00000420995 PROCA1Q8NCQ7 364 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-204ENST00000420995 KCNK3O14649 394 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 MARCH6O60337 910 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-204ENST00000420995 MAATS1Q7Z4T9 603 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 MREGQ8N565 214 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 SCFD1Q8WVM8 642 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 LRRC27Q9C0I9 530 aa17.45■□□□□ 0.38
TRIM13-204ENST00000420995 GNPATO15228 680 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 SEC24CP53992 1094 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 ASIC2Q16515 512 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 KIAA1024Q9UPX6 916 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 EPS15P42566 896 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 ERVK-9P63128 1117 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 PTK2Q05397 1052 aa17.44■□□□□ 0.38
TRIM13-204ENST00000420995 HLTFQ14527 1009 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM13-204ENST00000420995 HERC4Q5GLZ8 1057 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms