RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
RFFL-205ENST00000415395 ELP3Q9H9T3 547 aa12.91□□□□□ -0.34
RFFL-205ENST00000415395 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
RFFL-205ENST00000415395 KDM3AQ9Y4C1 1321 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 AKR1B15C9JRZ8 316 aaPredicted RBP12.9□□□□□ -0.34
RFFL-205ENST00000415395 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
RFFL-205ENST00000415395 ZNF76P36508 570 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 DPYDQ12882 1025 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 PRR16Q569H4 304 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 KRT79Q5XKE5 535 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 NIPA1Q7RTP0 329 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 LENG9Q96B70 501 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 TEX13BQ9BXU2 312 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
RFFL-205ENST00000415395 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
RFFL-205ENST00000415395 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
RFFL-205ENST00000415395 PP2D1A8MPX8 630 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 FAM86B1E9PN63 330 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 NFIBO00712 420 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 IRF6O14896 467 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 FOXN1O15353 648 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
RFFL-205ENST00000415395 FAM86B2P0C5J1 330 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 NAALADL2Q58DX5 795 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 HYIQ5T013 277 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 FASTKD5Q7L8L6 764 aaKnown RBP12.89□□□□□ -0.35
RFFL-205ENST00000415395 TMEM139Q8IV31 216 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 KCTD17Q8N5Z5 321 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 MMTAG2Q9BU76 263 aaKnown RBP12.89□□□□□ -0.35
RFFL-205ENST00000415395 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 FHOD1Q9Y613 1164 aa12.89□□□□□ -0.35
RFFL-205ENST00000415395 TUBBP07437 444 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 BCRP11274 1271 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 PLCG1P19174 1290 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CDC25AP30304 524 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 AMPD3Q01432 767 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 PABPC4Q13310 644 aaKnown RBP eCLIP12.88□□□□□ -0.35
RFFL-205ENST00000415395 CEP55Q53EZ4 464 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
RFFL-205ENST00000415395 XRRA1Q6P2D8 792 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CEP112Q8N8E3 955 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 ARFGAP3Q9NP61 516 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 RNF146Q9NTX7 359 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 MRFAP1Q9Y605 127 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 A0A1B0GTH6 734 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 POTEMA6NI47 508 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 KIF5CO60282 957 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 AFMP43652 599 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 SPAG1Q07617 926 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 TRIM14Q14142 442 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 BRD3Q15059 726 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 TMEM119Q4V9L6 283 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 PCNX4Q63HM2 1172 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CNGA4Q8IV77 575 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 TC2NQ8N9U0 490 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
RFFL-205ENST00000415395 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 OPTNQ96CV9 577 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 LRRC27Q9C0I9 530 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 AGTPBP1Q9UPW5 1226 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
RFFL-205ENST00000415395 SYNRGQ9UMZ2 1314 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 MEIS1O00470 390 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 SOCS7O14512 581 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 MSH4O15457 936 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 ERLIN1O75477 346 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 STAT3P40763 770 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
RFFL-205ENST00000415395 GRB10Q13322 594 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 KCNB1Q14721 858 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 WNK4Q96J92 1243 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 MTRQ99707 1265 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 LOXHD1Q8IVV2 1947 aa12.87□□□□□ -0.35
RFFL-205ENST00000415395 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms