RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 KRT25Q7Z3Z0 450 aa12.53□□□□□ -0.4
RCC1-204ENST00000398958 ADSSL1Q8N142 457 aa12.53□□□□□ -0.4
RCC1-204ENST00000398958 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.42e-11■■■■■ 62.9
RCC1-204ENST00000398958 PCMTD1Q96MG8 357 aaPredicted RBP12.53□□□□□ -0.4
RCC1-204ENST00000398958 PURBQ96QR8 312 aaKnown RBP12.53□□□□□ -0.4
RCC1-204ENST00000398958 KANSL2Q9H9L4 492 aa12.53□□□□□ -0.4
RCC1-204ENST00000398958 LRWD1Q9UFC0 647 aa12.53□□□□□ -0.4
RCC1-204ENST00000398958 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
RCC1-204ENST00000398958 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 EBAG9O00559 213 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 CHMP2AO43633 222 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 NDUFB10O96000 172 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
RCC1-204ENST00000398958 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 NPHP3-ACAD11A0A0J9YXS1 232 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 MEIS1O00470 390 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 GOLGA6DP0CG33 693 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 CCDC91Q7Z6B0 441 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 CSGALNACT2Q8N6G5 542 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 KAT2BQ92831 832 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 TRIM9Q9C026 710 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 GOLGA6AQ9NYA3 693 aa12.52□□□□□ -0.41
RCC1-204ENST00000398958 EPN1Q9Y6I3 576 aaPredicted RBP12.52□□□□□ -0.41
RCC1-204ENST00000398958 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
RCC1-204ENST00000398958 NFKBIEO00221 500 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 ATP1A1P05023 1023 aaKnown RBP12.51□□□□□ -0.41
RCC1-204ENST00000398958 IRAK1P51617 712 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 RASA3Q14644 834 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
RCC1-204ENST00000398958 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
RCC1-204ENST00000398958 TMC4Q7Z404 712 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 EHD4Q9H223 541 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 EXOC1Q9NV70 894 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 KBTBD4Q9NVX7 518 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 TTC26A0AVF1 554 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 MYMKA6NI61 221 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 MNAT1P51948 309 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 GRB10Q13322 594 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
RCC1-204ENST00000398958 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 CDK5RAP3Q96JB5 506 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 P2RX7Q99572 595 aaKnown RBP12.51□□□□□ -0.41
RCC1-204ENST00000398958 HINFPQ9BQA5 517 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 PSTPIP2Q9H939 334 aa12.51□□□□□ -0.41
RCC1-204ENST00000398958 AGPSO00116 658 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 SHOX2O60902 331 aaPredicted RBP12.5□□□□□ -0.41
RCC1-204ENST00000398958 NDUFA10O95299 355 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 MYBL2P10244 700 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
RCC1-204ENST00000398958 CYP4A11Q02928 519 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
RCC1-204ENST00000398958 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 SNX29Q8TEQ0 813 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 PNMA5Q96PV4 448 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 CEP89Q96ST8 783 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 DUSP9Q99956 384 aaKnown RBP12.5□□□□□ -0.41
RCC1-204ENST00000398958 RMND1Q9NWS8 449 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 REXO2Q9Y3B8 237 aaKnown RBP12.5□□□□□ -0.41
RCC1-204ENST00000398958 INPP5BP32019 993 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 FBXW10Q5XX13 1052 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 KIAA0895Q8NCT3 520 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 CCSER1Q9C0I3 900 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 BLOC1S4Q9NUP1 217 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 LIMA1Q9UHB6 759 aaKnown RBP12.5□□□□□ -0.41
RCC1-204ENST00000398958 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
RCC1-204ENST00000398958 TARSL2A2RTX5 802 aaKnown RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 GOLGA6BA6NDN3 693 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 SECISBP2LQ93073 1101 aaKnown RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 HAUS4Q9H6D7 363 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 E9PMD0 336 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 PSMA7O14818 248 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 SP4Q02446 784 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 TRIM14Q14142 442 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 PRR16Q569H4 304 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
RCC1-204ENST00000398958 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
RCC1-204ENST00000398958 GIMAP8Q8ND71 665 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms