RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SIK3Q9Y2K2 1263 aa19.3■□□□□ 0.68
DDX28-201ENST00000332395 SMCHD1A6NHR9 2005 aa19.3■□□□□ 0.68
DDX28-201ENST00000332395 FRMD3A2A2Y4 597 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 SPATA31C1P0DKV0 1188 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 FKBP3Q00688 224 aaKnown RBP19.29■□□□□ 0.68
DDX28-201ENST00000332395 RAD51AP2Q09MP3 1159 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 ARSHQ5FYA8 562 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 HERC4Q5GLZ8 1057 aaPredicted RBP19.29■□□□□ 0.68
DDX28-201ENST00000332395 CYP2W1Q8TAV3 490 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 ZNRF3Q9ULT6 936 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 PITPNM2Q9BZ72 1349 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 TBC1D12O60347 775 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 KRT18P05783 430 aaKnown RBP19.29■□□□□ 0.68
DDX28-201ENST00000332395 ZNF76P36508 570 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 KIF4BQ2VIQ3 1234 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.29■□□□□ 0.68
DDX28-201ENST00000332395 VAV3Q9UKW4 847 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 KIF13BQ9NQT8 1826 aa19.29■□□□□ 0.68
DDX28-201ENST00000332395 TRAF5O00463 557 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 CYLC1P35663 651 aaPredicted RBP19.28■□□□□ 0.68
DDX28-201ENST00000332395 PSMC6P62333 389 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 HERVK_113P62684 666 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 CCDC84Q86UT8 332 aaPredicted RBP19.28■□□□□ 0.68
DDX28-201ENST00000332395 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 NIM1KQ8IY84 436 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 MTMR14Q8NCE2 650 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 VPS33BQ9H267 617 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 RANBP17Q9H2T7 1088 aaKnown RBP19.28■□□□□ 0.68
DDX28-201ENST00000332395 VCPKMTQ9H867 229 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 NHEJ1Q9H9Q4 299 aaPredicted RBP19.28■□□□□ 0.68
DDX28-201ENST00000332395 CDC23Q9UJX2 597 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 DNM3Q9UQ16 869 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 COL4A3BPQ9Y5P4 624 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 STK24Q9Y6E0 443 aa19.28■□□□□ 0.68
DDX28-201ENST00000332395 MEIS1O00470 390 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 CFBP00751 764 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 ERCC3P19447 782 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 KRT83P78385 493 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 RSRC2Q7L4I2 434 aaKnown RBP19.27■□□□□ 0.68
DDX28-201ENST00000332395 FAM83AQ86UY5 434 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 NELFCDQ8IXH7 590 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 CCDC170Q8IYT3 715 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 CHURC1Q8WUH1 139 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 SCFD1Q8WVM8 642 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 NAPGQ99747 312 aaPredicted RBP19.27■□□□□ 0.68
DDX28-201ENST00000332395 HAUS4Q9H6D7 363 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 FAM207AQ9NSI2 230 aaPredicted RBP19.27■□□□□ 0.68
DDX28-201ENST00000332395 FAM53CQ9NYF3 392 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 TRIM10Q9UDY6 481 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 IGLV3-22A0A075B6J6 115 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 CLCN6P51797 869 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 CDK17Q00537 523 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 PABPC4Q13310 644 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDX28-201ENST00000332395 TUBB2AQ13885 445 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
DDX28-201ENST00000332395 KRT222Q8N1A0 295 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 SYT2Q8N9I0 419 aaPredicted RBP19.27■□□□□ 0.68
DDX28-201ENST00000332395 TUBB2BQ9BVA1 445 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 EMILIN3Q9NT22 766 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 GUCA1BQ9UMX6 200 aa19.27■□□□□ 0.68
DDX28-201ENST00000332395 EPHB6O15197 1021 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 CAP2P40123 477 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 TEX35Q5T0J7 233 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 TBC1D5Q92609 795 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 CEP63Q96MT8 703 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 ZHX3Q9H4I2 956 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 MMRN2Q9H8L6 949 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
DDX28-201ENST00000332395 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 HNRNPH3P31942 346 aaKnown RBP19.26■□□□□ 0.67
DDX28-201ENST00000332395 GIT2Q14161 759 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 CCDC40Q4G0X9 1142 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 KCTD10Q9H3F6 313 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 ZNF446Q9NWS9 450 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 PLAGL2Q9UPG8 496 aa19.26■□□□□ 0.67
DDX28-201ENST00000332395 A0A0U1RQG5 324 aaPredicted RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 EIF3CLB5ME19 914 aaKnown RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 PLA2G6O60733 806 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 IPO7O95373 1038 aaKnown RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 CYP4A11Q02928 519 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 TERF2Q15554 542 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 ZNF662Q6ZS27 426 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 SRGAP1Q7Z6B7 1085 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 GPR161Q8N6U8 529 aaKnown RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 GOLGA1Q92805 767 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 EIF3CQ99613 913 aaKnown RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 TANGO6Q9C0B7 1094 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 ARGLU1Q9NWB6 273 aaPredicted RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 CXCL9Q07325 125 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 CCDC122Q5T0U0 273 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 DEFB132Q7Z7B7 95 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 KIAA1328Q86T90 577 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 FAM160B2Q86V87 743 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 ZBED3Q96IU2 234 aaPredicted RBP19.25■□□□□ 0.67
DDX28-201ENST00000332395 REEP2Q9BRK0 252 aa19.25■□□□□ 0.67
DDX28-201ENST00000332395 POLR3CQ9BUI4 534 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms