RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ZNF70Q9UC06 446 aaPredicted RBP17.61■□□□□ 0.41
SYNM-201ENST00000328642 KRT19P08727 400 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 PEX3P56589 373 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 OSTNP61366 133 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 C8orf74Q6P047 294 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 ATP2C2O75185 946 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 STAT1P42224 750 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 RHBDL3P58872 404 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 SND1Q7KZF4 910 aaKnown RBP eCLIP17.61■□□□□ 0.41
SYNM-201ENST00000328642 FAM186BQ8IYM0 893 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
SYNM-201ENST00000328642 PPP1R3GB7ZBB8 358 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 MICALL2Q8IY33 904 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 HYOU1Q9Y4L1 999 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 TRIM49P0CI25 452 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 TRIM49CP0CI26 452 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 GYS2P54840 703 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 MTMR2Q13614 643 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 DCAF15Q66K64 600 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 RBM43Q6ZSC3 357 aaKnown RBP17.6■□□□□ 0.41
SYNM-201ENST00000328642 TC2NQ8N9U0 490 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 HNRNPDLO14979 420 aaKnown RBP17.6■□□□□ 0.41
SYNM-201ENST00000328642 PMS1P54277 932 aaKnown RBP17.6■□□□□ 0.41
SYNM-201ENST00000328642 SLC7A5Q01650 507 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 VWA3BQ502W6 1294 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 APOBEC3HQ6NTF7 200 aaKnown RBP17.6■□□□□ 0.41
SYNM-201ENST00000328642 HHIPL2Q6UWX4 724 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 UHMK1Q8TAS1 419 aaKnown RBP17.6■□□□□ 0.41
SYNM-201ENST00000328642 POMGNT1Q8WZA1 660 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
SYNM-201ENST00000328642 GBP6Q6ZN66 633 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 PEX26Q7Z412 305 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 MRRFQ96E11 262 aaKnown RBP17.59■□□□□ 0.41
SYNM-201ENST00000328642 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 IMPG2Q9BZV3 1241 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 RIC8AQ9NPQ8 531 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 ADD3Q9UEY8 706 aaKnown RBP17.59■□□□□ 0.41
SYNM-201ENST00000328642 PACSIN2Q9UNF0 486 aaPredicted RBP17.59■□□□□ 0.41
SYNM-201ENST00000328642 LRRC53A6NM62 1247 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 LGALS16A8MUM7 142 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 TFRCP02786 760 aaKnown RBP17.59■□□□□ 0.41
SYNM-201ENST00000328642 CAPN2P17655 700 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 SHMT1P34896 483 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 VPS41P49754 854 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 DAAM2Q86T65 1068 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 DNAAF5Q86Y56 855 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 BPIFA3Q9BQP9 254 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 SELENOOQ9BVL4 669 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 HAUS4Q9H6D7 363 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
SYNM-201ENST00000328642 ADGRG1Q9Y653 693 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 CCDC172P0C7W6 258 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 GFPT1Q06210 699 aaPredicted RBP17.59■□□□□ 0.41
SYNM-201ENST00000328642 ADSSL1Q8N142 457 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 DCAF4Q8WV16 495 aa17.59■□□□□ 0.41
SYNM-201ENST00000328642 CCDC66A2RUB6 948 aa17.58■□□□□ 0.41
SYNM-201ENST00000328642 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.41
SYNM-201ENST00000328642 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.41
SYNM-201ENST00000328642 ZKSCAN4Q969J2 545 aaPredicted RBP17.58■□□□□ 0.41
SYNM-201ENST00000328642 VTI1AQ96AJ9 217 aa17.58■□□□□ 0.41
SYNM-201ENST00000328642 OGFRQ9NZT2 677 aa17.58■□□□□ 0.41
SYNM-201ENST00000328642 GCNT4Q9P109 453 aa17.58■□□□□ 0.41
SYNM-201ENST00000328642 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.41
SYNM-201ENST00000328642 TUBB4AP04350 444 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 IL1R1P14778 569 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 CD19P15391 556 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 SNRNP48Q6IEG0 339 aaKnown RBP17.58■□□□□ 0.4
SYNM-201ENST00000328642 PARVGQ9HBI0 331 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 CDC23Q9UJX2 597 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 POTEB2H3BUK9 544 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 IFI16Q16666 785 aaKnown RBP17.58■□□□□ 0.4
SYNM-201ENST00000328642 RNF207Q6ZRF8 634 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 TAB3Q8N5C8 712 aaPredicted RBP17.58■□□□□ 0.4
SYNM-201ENST00000328642 CCSER1Q9C0I3 900 aa17.58■□□□□ 0.4
SYNM-201ENST00000328642 RSPH10B2B2RC85 870 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 NCK2O43639 380 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 RSPH10BP0C881 870 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 ACTN1P12814 892 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 KIF11P52732 1056 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 STRN3Q13033 797 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 RPS6KA1Q15418 735 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 TTC16Q8NEE8 873 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 IL17RAQ96F46 866 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 HPDP32754 393 aaPredicted RBP17.57■□□□□ 0.4
SYNM-201ENST00000328642 ZBED6P86452 979 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 C2orf54Q08AI8 447 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 RSBN1LQ6PCB5 846 aaPredicted RBP17.57■□□□□ 0.4
SYNM-201ENST00000328642 DCPSQ96C86 337 aaKnown RBP17.57■□□□□ 0.4
SYNM-201ENST00000328642 EIF2AK1Q9BQI3 630 aaKnown RBP17.57■□□□□ 0.4
SYNM-201ENST00000328642 VAV2P52735 878 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 DGKZQ13574 1117 aa17.57■□□□□ 0.4
SYNM-201ENST00000328642 GSPT2Q8IYD1 628 aaKnown RBP17.57■□□□□ 0.4
SYNM-201ENST00000328642 GYPCP04921 128 aa17.56■□□□□ 0.4
SYNM-201ENST00000328642 PNMA6AP0CW24 399 aaPredicted RBP17.56■□□□□ 0.4
SYNM-201ENST00000328642 KCNH2Q12809 1159 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms