RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 VAV2P52735 878 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 KLRC3Q07444 240 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
CHFR-202ENST00000315585 WDR93Q6P2C0 686 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 TRIM58Q8NG06 486 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 LUC7LQ9NQ29 371 aaKnown RBP16.53■□□□□ 0.24
CHFR-202ENST00000315585 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 MAP2K7O14733 419 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 TRAF1Q13077 416 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 TNFAIP1Q13829 316 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 TTBK2Q6IQ55 1244 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 TEX2Q8IWB9 1127 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 ATRIPQ8WXE1 791 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
CHFR-202ENST00000315585 CEP63Q96MT8 703 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 HERVK_113P62684 666 aa16.52■□□□□ 0.24
CHFR-202ENST00000315585 HAUS3Q68CZ6 603 aa16.52■□□□□ 0.24
CHFR-202ENST00000315585 DYMQ7RTS9 669 aa16.52■□□□□ 0.24
CHFR-202ENST00000315585 SECISBP2LQ93073 1101 aaKnown RBP16.52■□□□□ 0.24
CHFR-202ENST00000315585 EPC1Q9H2F5 836 aa16.52■□□□□ 0.24
CHFR-202ENST00000315585 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
CHFR-202ENST00000315585 MYOZ2Q9NPC6 264 aa16.52■□□□□ 0.24
CHFR-202ENST00000315585 CNTNAP1P78357 1384 aa16.52■□□□□ 0.23
CHFR-202ENST00000315585 POTEMA6NI47 508 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 TACC1O75410 805 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 EHHADHQ08426 723 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 BEND6Q5SZJ8 279 aaPredicted RBP16.51■□□□□ 0.23
CHFR-202ENST00000315585 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 TARSL2A2RTX5 802 aaKnown RBP16.51■□□□□ 0.23
CHFR-202ENST00000315585 SLURP2P0DP57 97 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 BMP3P12645 472 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 SLC16A2P36021 539 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 KCTD17Q8N5Z5 321 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 NEK11Q8NG66 645 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 ERMNQ8TAM6 284 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 ALS2CR12Q96Q35 445 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 JRKLQ9Y4A0 524 aa16.51■□□□□ 0.23
CHFR-202ENST00000315585 NFKBIEO00221 500 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 PRLRP16471 622 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 PURBQ96QR8 312 aaKnown RBP16.5■□□□□ 0.23
CHFR-202ENST00000315585 MMRN2Q9H8L6 949 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 PANK4Q9NVE7 773 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 FAM184BQ9ULE4 1060 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 CYP3A7-CYP3A51PA0A087WV96 503 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 WNT10BO00744 389 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 TBX3O15119 743 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 NDUFB10O96000 172 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 FOSP01100 380 aaPredicted RBP16.5■□□□□ 0.23
CHFR-202ENST00000315585 CYP3A7P24462 503 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 ZNF280AP59817 542 aaPredicted RBP16.5■□□□□ 0.23
CHFR-202ENST00000315585 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 SYN2Q92777 582 aaPredicted RBP16.5■□□□□ 0.23
CHFR-202ENST00000315585 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 IFIH1Q9BYX4 1025 aaKnown RBP16.5■□□□□ 0.23
CHFR-202ENST00000315585 SIK3Q9Y2K2 1263 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
CHFR-202ENST00000315585 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 RASSF10A6NK89 507 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 AKR1B10O60218 316 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 SASH3O75995 380 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 LCA5LO95447 670 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 OAS2P29728 719 aaKnown RBP16.49■□□□□ 0.23
CHFR-202ENST00000315585 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
CHFR-202ENST00000315585 CDC37Q16543 378 aaPredicted RBP16.49■□□□□ 0.23
CHFR-202ENST00000315585 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 HSP90B2PQ58FF3 399 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 RUBCNQ92622 972 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 HAS1Q92839 578 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 AMNQ9BXJ7 453 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 ABL1P00519 1130 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 RHOXF2BP0C7M4 288 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 COASYQ13057 564 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 UBE2SQ16763 222 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 BTNL9Q6UXG8 535 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 RHOXF2Q9BQY4 288 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
CHFR-202ENST00000315585 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
CHFR-202ENST00000315585 CCDC40Q4G0X9 1142 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 CCDC155Q8N6L0 562 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 CAGE1Q8TC20 777 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 TRAF5O00463 557 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 CYP2C19P33261 490 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 ITIH3Q06033 890 aa16.48■□□□□ 0.23
CHFR-202ENST00000315585 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms