RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RGL1Q9NZL6 768 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 CCPG1Q9ULG6 757 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.29□□□□□ -1.24
USP47-201ENST00000305481 A0A0U1RQJ8 604 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ERVK-24P63145 666 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 CYP4A11Q02928 519 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 HAUS3Q68CZ6 603 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 SYT2Q8N9I0 419 aaPredicted RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 ATRIPQ8WXE1 791 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 SLC5A5Q92911 643 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ZKSCAN4Q969J2 545 aaPredicted RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 EIF2AK1Q9BQI3 630 aaKnown RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 BCAS3Q9H6U6 928 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 TBC1D7Q9P0N9 293 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 MAGEC2Q9UBF1 373 aaPredicted RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 ZNF112Q9UJU3 913 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 TTC26A0AVF1 554 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 SLITRK3O94933 977 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ARP10275 920 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 VCAM1P19320 739 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 KLK7P49862 253 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 PABPC4Q13310 644 aaKnown RBP eCLIP7.28□□□□□ -1.244e-15■□□□□ 10.3
USP47-201ENST00000305481 CEP55Q53EZ4 464 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 MUM1L1Q5H9M0 696 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 FAM26FQ5R3K3 315 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ANGEL2Q5VTE6 544 aaKnown RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 CNGA4Q8IV77 575 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 HOOK2Q96ED9 719 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 WNK4Q96J92 1243 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 TTYH3Q9C0H2 523 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 SLC38A10Q9HBR0 1119 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ABHD10Q9NUJ1 306 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ITGB5P18084 799 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 DNM2P50570 870 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 HIRAP54198 1017 aaPredicted RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 ETF1P62495 437 aaKnown RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 LRRC63Q05C16 580 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 SPP2Q13103 211 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 PPP2R5CQ13362 524 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 GIT2Q14161 759 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 MYOCDQ8IZQ8 938 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 CPXCR1Q8N123 301 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ZNF710Q8N1W2 664 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 IL31RAQ8NI17 732 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 KIF18AQ8NI77 898 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 SCFD1Q8WVM8 642 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 CCDC51Q96ER9 411 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 POLR3CQ9BUI4 534 aaPredicted RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 MRPL44Q9H9J2 332 aaKnown RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 RAVER2Q9HCJ3 691 aaKnown RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 BMP2KQ9NSY1 1161 aaPredicted RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 DNM3Q9UQ16 869 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ADGRG1Q9Y653 693 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 KIF2AO00139 706 aaPredicted RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 ZBTB39O15060 712 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ZSCAN12O43309 604 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 KRT9P35527 623 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 CASP5P51878 434 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 GHRHRQ02643 423 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 LRCH2Q5VUJ6 765 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 FOXR2Q6PJQ5 311 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 B3GNT9Q6UX72 402 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 ERMNQ8TAM6 284 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 NAA15Q9BXJ9 866 aaKnown RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 PITPNM2Q9BZ72 1349 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 KCTD10Q9H3F6 313 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 GPRC5DQ9NZD1 345 aa7.28□□□□□ -1.24
USP47-201ENST00000305481 WRAP73Q9P2S5 460 aaPredicted RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 RBBP6Q7Z6E9 1792 aaKnown RBP7.28□□□□□ -1.24
USP47-201ENST00000305481 PES1O00541 588 aaKnown RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 CCP110O43303 1012 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 PTPRAP18433 802 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 HOXD13P35453 343 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 TBC1D8BQ0IIM8 1120 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 TRIM14Q14142 442 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 CTTNQ14247 550 aaKnown RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 SYCP1Q15431 976 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 HERC4Q5GLZ8 1057 aaPredicted RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 FAM114A1Q8IWE2 563 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 CCDC65Q8IXS2 484 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 SCYL3Q8IZE3 742 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 DNAJC7Q99615 494 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 REEP2Q9BRK0 252 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 NOC4LQ9BVI4 516 aaKnown RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 RUSC1Q9BVN2 902 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 RPAP3Q9H6T3 665 aaPredicted RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 POLD4Q9HCU8 107 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 PPP1R9AQ9ULJ8 1098 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 CAPN11Q9UMQ6 739 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 RSPH10B2B2RC85 870 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 FLOT1O75955 427 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 RSPH10BP0C881 870 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 EPS15P42566 896 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 MTIF2P46199 727 aaKnown RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 BACE1P56817 501 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 NAA30Q147X3 362 aaPredicted RBP7.27□□□□□ -1.25
USP47-201ENST00000305481 WDR59Q6PJI9 974 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms