RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 RWDD2AQ9UIY3 292 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 IPO7O95373 1038 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 MYL1P05976 194 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 FCER1AP12319 257 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 INPP5BP32019 993 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 CLCN6P51797 869 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 CACNB1Q02641 598 aaPredicted RBP9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 CYP4A11Q02928 519 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 SPP2Q13103 211 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 DGKZQ13574 1117 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 DCAF15Q66K64 600 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 ARMCX5Q6P1M9 558 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 HAS1Q92839 578 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 LRRC27Q9C0I9 530 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 FEM1BQ9UK73 627 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 KCNJ18B7U540 433 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 E9PMD0 336 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 MEIS1O00470 390 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 TEX33O43247 280 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 ATP8B1O43520 1251 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 TBC1D12O60347 775 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 SPAG1Q07617 926 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 GPS2Q13227 327 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 KCNJ12Q14500 433 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 TRMT1LQ7Z2T5 733 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 RPAINQ86UA6 219 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 LDHDQ86WU2 507 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 PIK3R5Q8WYR1 880 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 MED15Q96RN5 788 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 WRNIP1Q96S55 665 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 NT5C3AQ9H0P0 336 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 PNMA2Q9UL42 364 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 FHOD1Q9Y613 1164 aa9.88□□□□□ -0.83
MTHFD1-201ENST00000216605 POTEB3A0JP26 581 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 POTECB2RU33 542 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 PNMA6AP0CW24 399 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ERCC3P19447 782 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 MTIF2P46199 727 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ETF1P62495 437 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 MTMR2Q13614 643 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 C11orf91Q3C1V1 193 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 HAUS3Q68CZ6 603 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 POTEBQ6S5H4 581 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 NME8Q8N427 588 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 CYP2W1Q8TAV3 490 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 DDX12PQ92771 950 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ZKSCAN4Q969J2 545 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 HOOK2Q96ED9 719 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 AGBL1Q96MI9 1066 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 NUCKS1Q9H1E3 243 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ST7Q9NRC1 585 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 MYMKA6NI61 221 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ZNF18P17022 549 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 UBXN1Q04323 297 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 STK4Q13043 487 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 BTNL9Q6UXG8 535 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 RAD54LQ92698 747 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 PNMA5Q96PV4 448 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ZNF541Q9H0D2 1346 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 KDM3AQ9Y4C1 1321 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 BICDL2A1A5D9 508 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 RHOBTB3O94955 611 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 GSCP56915 257 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 KCNB1Q14721 858 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 LRRC41Q15345 812 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 SLC30A10Q6XR72 485 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 ADSSL1Q8N142 457 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 PRPF38AQ8NAV1 312 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 LRRC15Q8TF66 581 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 C7orf25Q9BPX7 421 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 RAVER2Q9HCJ3 691 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 TCEAL9Q9UHQ7 104 aa9.87□□□□□ -0.83
MTHFD1-201ENST00000216605 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 POTEFA5A3E0 1075 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 DDX39AO00148 427 aaKnown RBP9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 POTEIP0CG38 1075 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 KRT31Q15323 416 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 NSMFQ6X4W1 530 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 KCNK18Q7Z418 384 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 GPBP1Q86WP2 473 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 TXLNBQ8N3L3 684 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 SLF1Q9BQI6 1058 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 BLOC1S4Q9NUP1 217 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 GGA3Q9NZ52 723 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 DNAI1Q9UI46 699 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 FAM86B1E9PN63 330 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 EDIL3O43854 480 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 KLRC4O43908 158 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 FAM86B2P0C5J1 330 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 ZNF280AP59817 542 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 PABPC4Q13310 644 aaKnown RBP eCLIP9.86□□□□□ -0.833e-23■■■■■ 42.9
MTHFD1-201ENST00000216605 SETDB1Q15047 1291 aa9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 HERC4Q5GLZ8 1057 aaPredicted RBP9.86□□□□□ -0.83
MTHFD1-201ENST00000216605 BAG1Q99933 345 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms