RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 Q4G0T1 1027 aa23.73■■□□□ 1.39
LIME1-210ENST00000621325 CENPPQ6IPU0 288 aa23.73■■□□□ 1.39
LIME1-210ENST00000621325 CNGA4Q8IV77 575 aa23.73■■□□□ 1.39
LIME1-210ENST00000621325 SLFN12Q8IYM2 578 aa23.73■■□□□ 1.39
LIME1-210ENST00000621325 DNAI1Q9UI46 699 aa23.73■■□□□ 1.39
LIME1-210ENST00000621325 CFBP00751 764 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 NOC3LQ8WTT2 800 aaKnown RBP23.72■■□□□ 1.39
LIME1-210ENST00000621325 CNOT6LQ96LI5 555 aaKnown RBP23.72■■□□□ 1.39
LIME1-210ENST00000621325 TUBGCP2Q9BSJ2 902 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 KDM3AQ9Y4C1 1321 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 NPHP3-ACAD11A0A0J9YXS1 232 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 POTEFA5A3E0 1075 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 POTEIP0CG38 1075 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 POTEGQ6S5H5 508 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 POTEEQ6S8J3 1075 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 NT5C3AQ9H0P0 336 aa23.72■■□□□ 1.39
LIME1-210ENST00000621325 PIK3CDO00329 1044 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 MSH4O15457 936 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 CACNB1Q02641 598 aaPredicted RBP23.71■■□□□ 1.39
LIME1-210ENST00000621325 MCTP2Q6DN12 878 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 RANBP17Q9H2T7 1088 aaKnown RBP23.71■■□□□ 1.39
LIME1-210ENST00000621325 MRPL44Q9H9J2 332 aaKnown RBP23.71■■□□□ 1.39
LIME1-210ENST00000621325 ASTN2O75129 1339 aaPredicted RBP23.71■■□□□ 1.39
LIME1-210ENST00000621325 A0A0U1RQJ8 604 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 PLA2G4BP0C869 781 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 PPP1R2P41236 205 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 NCAPH2Q6IBW4 605 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 SLC30A10Q6XR72 485 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 ATRIPQ8WXE1 791 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 ABHD10Q9NUJ1 306 aa23.71■■□□□ 1.39
LIME1-210ENST00000621325 CIITAP33076 1130 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 IRX5P78411 483 aaPredicted RBP23.7■■□□□ 1.38
LIME1-210ENST00000621325 MAP3K10Q02779 954 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 RAD51AP2Q09MP3 1159 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 COASYQ13057 564 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 CATSPER3Q86XQ3 398 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 CHURC1Q8WUH1 139 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 FGFBP2Q9BYJ0 223 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 LRRC27Q9C0I9 530 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 ZNF215Q9UL58 517 aaPredicted RBP23.7■■□□□ 1.38
LIME1-210ENST00000621325 PHF20L1A8MW92 1017 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 TPM1P09493 284 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 ERVK-24P63145 666 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 GUF1Q8N442 669 aaKnown RBP23.7■■□□□ 1.38
LIME1-210ENST00000621325 NAA15Q9BXJ9 866 aaKnown RBP23.7■■□□□ 1.38
LIME1-210ENST00000621325 TBC1D7Q9P0N9 293 aa23.7■■□□□ 1.38
LIME1-210ENST00000621325 MEIS1O00470 390 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 POLD1P28340 1107 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 KRT9P35527 623 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 PSMC6P62333 389 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 UBXN2AP68543 259 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 TEPSINQ96N21 525 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 PANK4Q9NVE7 773 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 FER1L6Q2WGJ9 1857 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 TTC26A0AVF1 554 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 TBX3O15119 743 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 ASNSP08243 561 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 FECHP22830 423 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 ZNF76P36508 570 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 NCBP1Q09161 790 aaKnown RBP23.69■■□□□ 1.38
LIME1-210ENST00000621325 MIIPQ5JXC2 388 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 GPBP1Q86WP2 473 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 CCDC51Q96ER9 411 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 ZNF341Q9BYN7 854 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 ADGRG1Q9Y653 693 aa23.69■■□□□ 1.38
LIME1-210ENST00000621325 SPATA31C1P0DKV0 1188 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 MTIF2P46199 727 aaKnown RBP23.68■■□□□ 1.38
LIME1-210ENST00000621325 KLK7P49862 253 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 DGKZQ13574 1117 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 SAMD7Q7Z3H4 446 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 IGLV3-22A0A075B6J6 115 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 A0A1W2PQC6 194 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 CYP3A4P08684 503 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 CYP11B2P19099 503 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 INPP5BP32019 993 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 MTFR1LQ9H019 292 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 VAV3Q9UKW4 847 aa23.68■■□□□ 1.38
LIME1-210ENST00000621325 DNM2P50570 870 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 ZNF280AP59817 542 aaPredicted RBP23.67■■□□□ 1.38
LIME1-210ENST00000621325 TRIM14Q14142 442 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 TNIP1Q15025 636 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 FAM20AQ96MK3 541 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 WDR24Q96S15 920 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 WDR18Q9BV38 432 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 SH2D4AQ9H788 454 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 GCOM1H8Y6P7 765 aaPredicted RBP23.67■■□□□ 1.38
LIME1-210ENST00000621325 CCDC175P0C221 793 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 POLR2MP0CAP2 368 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 PRELPP51888 382 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 RASSF7Q02833 373 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 PSMD2Q13200 908 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 ARSHQ5FYA8 562 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 FAM114A1Q8IWE2 563 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 SECISBP2LQ93073 1101 aaKnown RBP23.67■■□□□ 1.38
LIME1-210ENST00000621325 FEZ1Q99689 392 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 NOC4LQ9BVI4 516 aaKnown RBP23.67■■□□□ 1.38
LIME1-210ENST00000621325 L2HGDHQ9H9P8 463 aa23.67■■□□□ 1.38
LIME1-210ENST00000621325 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.67■■□□□ 1.38
LIME1-210ENST00000621325 V9GYY5 206 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms