RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 LRRC63Q05C16 580 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SLC4A8Q2Y0W8 1093 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SRGAP1Q7Z6B7 1085 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RAD54LQ92698 747 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 KCNMB3Q9NPA1 279 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RNF187Q5TA31 235 aaPredicted RBP12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 DNAJC18Q9H819 358 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 KDM3AQ9Y4C1 1321 aa12.05□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PMS1P54277 932 aaKnown RBP12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ERVK-24P63145 666 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 LRRC31Q6UY01 552 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CCDC170Q8IYT3 715 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 OR8K1Q8NGG5 319 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 VPS33BQ9H267 617 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TAB2Q9NYJ8 693 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MACROD2A1Z1Q3 448 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 Q4G0T1 1027 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 JADE2Q9NQC1 790 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 IVLP07476 585 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 HAS1Q92839 578 aa12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 BIN2Q9UBW5 565 aaPredicted RBP12.04□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CCDC151A5D8V7 595 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 LCA5LO95447 670 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TECP42680 631 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 BEND6Q5SZJ8 279 aaPredicted RBP12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TMEM179Q6ZVK1 233 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 KIAA0895Q8NCT3 520 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 AFAP1L1Q8TED9 768 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 LARP4BQ92615 738 aaKnown RBP12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 RASSF10A6NK89 507 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PLA2G6O60733 806 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 NAP1L1P55209 391 aaKnown RBP12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PTPROQ16827 1216 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MAP9Q49MG5 647 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SIAH1Q8IUQ4 282 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SMARCAL1Q9NZC9 954 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PIK3CDO00329 1044 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SLC37A4O43826 429 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CIITAP33076 1130 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SLC7A5Q01650 507 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 UBXN1Q04323 297 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PDE4DQ08499 809 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 STK4Q13043 487 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ANKRD40Q6AI12 368 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 SUPT20HQ8NEM7 779 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 UBA5Q9GZZ9 404 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MAGEC2Q9UBF1 373 aaPredicted RBP12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CDC23Q9UJX2 597 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 PITPNM2Q9BZ72 1349 aa12.03□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ZNF185O15231 689 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TUBBP07437 444 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 CYP3A4P08684 503 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 ZBED6P86452 979 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TUBGCP2Q9BSJ2 902 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 TMEM260Q9NX78 707 aa12.02□□□□□ -0.48
SENP3-EIF4A1-201ENST00000614237 EP400Q96L91 3159 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 MYMKA6NI61 221 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CXCR5P32302 372 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 TRAF1Q13077 416 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KRT79Q5XKE5 535 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SLFN12Q8IYM2 578 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 KIRREL3Q8IZU9 778 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 BCAS4Q8TDM0 211 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PURBQ96QR8 312 aaKnown RBP12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PSMD14O00487 310 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 BACH1O14867 736 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 FOSP01100 380 aaPredicted RBP12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 WDR59Q6PJI9 974 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CEP112Q8N8E3 955 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 HNRNPLLQ8WVV9 542 aaKnown RBP12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CNKSR1Q969H4 720 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DNAJC19Q96DA6 116 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 CPVLQ9H3G5 476 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.49
SENP3-EIF4A1-201ENST00000614237 PCDHA2Q9Y5H9 948 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms