RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CSRNP1Q96S65 589 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 KDM3AQ9Y4C1 1321 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 SMCHD1A6NHR9 2005 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 POTEFA5A3E0 1075 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 POTEIP0CG38 1075 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 PSMD2Q13200 908 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 MAN2A1Q16706 1144 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 FAM26FQ5R3K3 315 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 POTEGQ6S5H5 508 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 POTEEQ6S8J3 1075 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 KIAA1328Q86T90 577 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 LACRTQ9GZZ8 138 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 NT5C3AQ9H0P0 336 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 GLT8D2Q9H1C3 349 aa25.21■■□□□ 1.63
SRRM1-222ENST00000596378 SYDE2Q5VT97 1194 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 GPBP1Q86WP2 473 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 FBXO11Q86XK2 927 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 NELFCDQ8IXH7 590 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 CEP112Q8N8E3 955 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 GMCL1P1Q8NEA9 526 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 NAP1L4Q99733 375 aaKnown RBP25.2■■□□□ 1.63
SRRM1-222ENST00000596378 HAUS4Q9H6D7 363 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 HDAC6Q9UBN7 1215 aa25.2■■□□□ 1.63
SRRM1-222ENST00000596378 CYP3A7-CYP3A51PA0A087WV96 503 aa25.2■■□□□ 1.62
SRRM1-222ENST00000596378 CYP3A7P24462 503 aa25.2■■□□□ 1.62
SRRM1-222ENST00000596378 HOXA13P31271 388 aaPredicted RBP25.2■■□□□ 1.62
SRRM1-222ENST00000596378 CC2D1AQ6P1N0 951 aaPredicted RBP25.2■■□□□ 1.62
SRRM1-222ENST00000596378 CRYGNQ8WXF5 182 aa25.2■■□□□ 1.62
SRRM1-222ENST00000596378 MMRN2Q9H8L6 949 aa25.2■■□□□ 1.62
SRRM1-222ENST00000596378 A0A1W2PQJ5 194 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 PPIP5K2O43314 1243 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 NPM3O75607 178 aaKnown RBP25.19■■□□□ 1.62
SRRM1-222ENST00000596378 AMPD2Q01433 879 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 FIGNQ5HY92 759 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 RBM26Q5T8P6 1007 aaKnown RBP25.19■■□□□ 1.62
SRRM1-222ENST00000596378 NCAPH2Q6IBW4 605 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 ETNPPLQ8TBG4 499 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 CNKSR1Q969H4 720 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 JAKMIP2Q96AA8 810 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 GMCL1Q96IK5 515 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 MBOAT7Q96N66 472 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 TSG101Q99816 390 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 DUSP10Q9Y6W6 482 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 TCP10L2B9ZVM9 353 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 FAM86B1E9PN63 330 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 FAM86B2P0C5J1 330 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 BMP3P12645 472 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 CYLC1P35663 651 aaPredicted RBP25.19■■□□□ 1.62
SRRM1-222ENST00000596378 DMTNQ08495 405 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 AP3B2Q13367 1082 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 ZCWPW2Q504Y3 356 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 ANKZF1Q9H8Y5 726 aa25.19■■□□□ 1.62
SRRM1-222ENST00000596378 MEIS1O00470 390 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 OPLAHO14841 1288 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 C21orf2O43822 256 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 ECE1P42892 770 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 KRT83P78385 493 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 SPIRE1Q08AE8 756 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 KRT26Q7Z3Y9 468 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 BMP2KQ9NSY1 1161 aaPredicted RBP25.18■■□□□ 1.62
SRRM1-222ENST00000596378 ATRNL1Q5VV63 1379 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 CLRN2A0PK11 232 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 ZNF263O14978 683 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 SASH3O75995 380 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 FGFR1OPO95684 399 aaKnown RBP25.18■■□□□ 1.62
SRRM1-222ENST00000596378 CYP11B2P19099 503 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 PLA2G4AP47712 749 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 LENG9Q96B70 501 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 TANGO6Q9C0B7 1094 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 MYO6Q9UM54 1294 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 PCDHA2Q9Y5H9 948 aa25.18■■□□□ 1.62
SRRM1-222ENST00000596378 TRAF5O00463 557 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 PSMC6P62333 389 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 CYP2W1Q8TAV3 490 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 ZHX3Q9H4I2 956 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 EIF3CLB5ME19 914 aaKnown RBP25.17■■□□□ 1.62
SRRM1-222ENST00000596378 ENTPD3O75355 529 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 TBC1D8O95759 1140 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 ATP1A1P05023 1023 aaKnown RBP25.17■■□□□ 1.62
SRRM1-222ENST00000596378 ARSHQ5FYA8 562 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 HERC4Q5GLZ8 1057 aaPredicted RBP25.17■■□□□ 1.62
SRRM1-222ENST00000596378 KIAA1755Q5JYT7 1200 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 CATSPER3Q86XQ3 398 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 SMCR8Q8TEV9 937 aaPredicted RBP25.17■■□□□ 1.62
SRRM1-222ENST00000596378 EIF3CQ99613 913 aaKnown RBP25.17■■□□□ 1.62
SRRM1-222ENST00000596378 ARHGAP20Q9P2F6 1191 aa25.17■■□□□ 1.62
SRRM1-222ENST00000596378 SPDYE3A6NKU9 549 aa25.16■■□□□ 1.62
SRRM1-222ENST00000596378 PSMD14O00487 310 aa25.16■■□□□ 1.62
SRRM1-222ENST00000596378 CC2D2BQ6DHV5 1058 aa25.16■■□□□ 1.62
SRRM1-222ENST00000596378 SLFN12Q8IYM2 578 aa25.16■■□□□ 1.62
SRRM1-222ENST00000596378 CCDC170Q8IYT3 715 aa25.16■■□□□ 1.62
SRRM1-222ENST00000596378 PNKPQ96T60 521 aa25.16■■□□□ 1.62
SRRM1-222ENST00000596378 TUBB2AQ13885 445 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 CCDC65Q8IXS2 484 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 TUBB2BQ9BVA1 445 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.15■■□□□ 1.62
SRRM1-222ENST00000596378 ABCB11O95342 1321 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 LRRC53A6NM62 1247 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 SRGAP2O75044 1071 aa25.15■■□□□ 1.62
SRRM1-222ENST00000596378 KRT18P05783 430 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms