RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ARHGAP1Q07960 439 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 PUM1Q14671 1186 aaKnown RBP eCLIP13.21□□□□□ -0.29
GGA3-206ENST00000578773 LY6KQ17RY6 165 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
GGA3-206ENST00000578773 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
GGA3-206ENST00000578773 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.3
GGA3-206ENST00000578773 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 MYH6P13533 1939 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 PER2O15055 1255 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 ITGB1P05556 798 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 CTSHP09668 335 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 CALML3P27482 149 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 ADD2P35612 726 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 THPOP40225 353 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 IKQ13123 557 aaPredicted RBP13.2□□□□□ -0.3
GGA3-206ENST00000578773 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
GGA3-206ENST00000578773 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
GGA3-206ENST00000578773 AACSQ86V21 672 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 MKL1Q969V6 931 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 SLC4A4Q9Y6R1 1079 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 R4GN57 208 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 DENND4AQ7Z401 1863 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 SETXQ7Z333 2677 aaKnown RBP13.2□□□□□ -0.3
GGA3-206ENST00000578773 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
GGA3-206ENST00000578773 FASNP49327 2511 aaKnown RBP13.19□□□□□ -0.3
GGA3-206ENST00000578773 ANKRD11Q6UB99 2663 aaPredicted RBP13.19□□□□□ -0.3
GGA3-206ENST00000578773 GPR179Q6PRD1 2367 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 RSPH10B2B2RC85 870 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-206ENST00000578773 RSPH10BP0C881 870 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 MCCP23508 829 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 EDNRBP24530 442 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 PDE4DQ08499 809 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 MFSD10Q14728 455 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 RSPO4Q2I0M5 234 aaPredicted RBP13.19□□□□□ -0.3
GGA3-206ENST00000578773 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
GGA3-206ENST00000578773 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 STAG1Q8WVM7 1258 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 CLP1Q92989 425 aaKnown RBP13.19□□□□□ -0.3
GGA3-206ENST00000578773 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
GGA3-206ENST00000578773 KAT6AQ92794 2004 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 HAS3O00219 553 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 SORBS3O60504 671 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 RB1P06400 928 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 ASGR2P07307 311 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 ANGPT1Q15389 498 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 KIAA0753Q2KHM9 967 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
GGA3-206ENST00000578773 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 CLEC4DQ8WXI8 215 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 NOP58Q9Y2X3 529 aaKnown RBP13.18□□□□□ -0.3
GGA3-206ENST00000578773 SPEGQ15772 3267 aa13.18□□□□□ -0.3
GGA3-206ENST00000578773 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 EMSYQ7Z589 1322 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 ATP8B2P98198 1209 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 TTF1Q15361 905 aaPredicted RBP13.17□□□□□ -0.3
GGA3-206ENST00000578773 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 SEPT8Q92599 483 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
GGA3-206ENST00000578773 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 ADD3Q9UEY8 706 aaKnown RBP13.17□□□□□ -0.3
GGA3-206ENST00000578773 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
GGA3-206ENST00000578773 MRPL42Q9Y6G3 142 aaKnown RBP13.17□□□□□ -0.3
GGA3-206ENST00000578773 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 C2CD4DB7Z1M9 353 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 TTLL1O95922 423 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 F2P00734 622 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 FDX1P10109 184 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 NPR3P17342 541 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
GGA3-206ENST00000578773 SLC16A2P36021 539 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 AMOTL1Q8IY63 956 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 FLCNQ8NFG4 579 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 ATP8B4Q8TF62 1192 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 POF1BQ8WVV4 589 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 S1PR5Q9H228 398 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
GGA3-206ENST00000578773 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
GGA3-206ENST00000578773 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
GGA3-206ENST00000578773 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms