RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 DPF3Q92784 378 aa4.62□□□□□ -1.67
TOP2A-202ENST00000577541 TTPALQ9BTX7 342 aa4.62□□□□□ -1.67
TOP2A-202ENST00000577541 KCNQ5Q9NR82 932 aa4.62□□□□□ -1.67
TOP2A-202ENST00000577541 TRBV23OR9-2A0A075B6M9 112 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 A0A087WZG4 1122 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 NPHP3-ACAD11A0A0J9YXS1 232 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 COL6A1P12109 1028 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 PAMP19021 973 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 MBLAC2Q68D91 279 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 REXO1Q8N1G1 1221 aaKnown RBP4.61□□□□□ -1.67
TOP2A-202ENST00000577541 NUDT10Q8NFP7 164 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 CLIP3Q96DZ5 547 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 NUDT11Q96G61 164 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 COPRSQ9NQ92 184 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 FAM86C1Q9NVL1 165 aa4.61□□□□□ -1.67
TOP2A-202ENST00000577541 STXBP3O00186 592 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 FOXN1O15353 648 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 VAMP4O75379 141 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 RAD17O75943 681 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 TP53P04637 393 aaPredicted RBP4.6□□□□□ -1.67
TOP2A-202ENST00000577541 ACRV1P26436 265 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 ADRA1BP35368 520 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 SLC6A11P48066 632 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 PPP2R5DQ14738 602 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 FAM89AQ96GI7 184 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 FAM161BQ96MY7 647 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 TMEM209Q96SK2 561 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 KBTBD4Q9NVX7 518 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 MARCH2Q9P0N8 246 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 PARP2Q9UGN5 583 aa4.6□□□□□ -1.67
TOP2A-202ENST00000577541 C2orf71A6NGG8 1288 aa4.59□□□□□ -1.67
TOP2A-202ENST00000577541 MAMDC4Q6UXC1 1216 aa4.59□□□□□ -1.67
TOP2A-202ENST00000577541 Q6ZUG5 572 aa4.59□□□□□ -1.67
TOP2A-202ENST00000577541 POLNQ7Z5Q5 900 aa4.59□□□□□ -1.67
TOP2A-202ENST00000577541 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
TOP2A-202ENST00000577541 NEIL1Q96FI4 390 aaPredicted RBP4.59□□□□□ -1.67
TOP2A-202ENST00000577541 TOE1Q96GM8 510 aaKnown RBP4.59□□□□□ -1.67
TOP2A-202ENST00000577541 PTGFRNQ9P2B2 879 aa4.59□□□□□ -1.67
TOP2A-202ENST00000577541 SUPT16HQ9Y5B9 1047 aaKnown RBP4.59□□□□□ -1.67
TOP2A-202ENST00000577541 MASP2O00187 686 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 KLHL18O94889 574 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 CCDC27Q2M243 656 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 DPY19L1Q2PZI1 675 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 SEZ6Q53EL9 994 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 IFNL2Q8IZJ0 200 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 ZNF764Q96H86 408 aaPredicted RBP4.58□□□□□ -1.68
TOP2A-202ENST00000577541 ZNF703Q9H7S9 590 aaPredicted RBP4.58□□□□□ -1.68
TOP2A-202ENST00000577541 ADARB2Q9NS39 739 aaKnown RBP4.58□□□□□ -1.68
TOP2A-202ENST00000577541 REXO2Q9Y3B8 237 aaKnown RBP4.58□□□□□ -1.68
TOP2A-202ENST00000577541 BACE2Q9Y5Z0 518 aa4.58□□□□□ -1.68
TOP2A-202ENST00000577541 C22orf46C9J442 243 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 DNAJA1P31689 397 aaKnown RBP4.57□□□□□ -1.68
TOP2A-202ENST00000577541 MCM4P33991 863 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 ZNF165P49910 485 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 PSMD2Q13200 908 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 TCEAL1Q15170 157 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 ZYXQ15942 572 aaKnown RBP4.57□□□□□ -1.68
TOP2A-202ENST00000577541 EPHA10Q5JZY3 1008 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 TEX2Q8IWB9 1127 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 SLC2A4RGQ9NR83 387 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 UBP1Q9NZI7 540 aa4.57□□□□□ -1.68
TOP2A-202ENST00000577541 TMEM191CA6NGB0 347 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 INO80B-WBP1J3KQ70 363 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 CBFA2T2O43439 604 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 NUDT3O95989 172 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 THBDP07204 575 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 ITGAEP38570 1179 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 C21orf58P58505 322 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 PHF19Q5T6S3 580 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 LAIR1Q6GTX8 287 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 TEPPQ6URK8 271 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 ADCY4Q8NFM4 1077 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 AJUBAQ96IF1 538 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 INO80BQ9C086 356 aaPredicted RBP4.56□□□□□ -1.68
TOP2A-202ENST00000577541 DTLQ9NZJ0 730 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 RBPJLQ9UBG7 517 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 SLC30A1Q9Y6M5 507 aa4.56□□□□□ -1.68
TOP2A-202ENST00000577541 SORBS3O60504 671 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 CSF2RBP32927 897 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 EIF4A3P38919 411 aaKnown RBP4.55□□□□□ -1.68
TOP2A-202ENST00000577541 RAC3P60763 192 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 FSTL1Q12841 308 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 PAPD7Q5XG87 772 aaKnown RBP4.55□□□□□ -1.68
TOP2A-202ENST00000577541 GPR155Q7Z3F1 870 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 SLITRK4Q8IW52 837 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 ARRDC4Q8NCT1 418 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 ZNF296Q8WUU4 475 aaPredicted RBP4.55□□□□□ -1.68
TOP2A-202ENST00000577541 RNF34Q969K3 372 aa4.55□□□□□ -1.68
TOP2A-202ENST00000577541 AURKAIP1Q9NWT8 199 aaPredicted RBP4.55□□□□□ -1.68
TOP2A-202ENST00000577541 XPCQ01831 940 aaPredicted RBP4.54□□□□□ -1.68
TOP2A-202ENST00000577541 MRPL58Q14197 206 aaKnown RBP4.54□□□□□ -1.68
TOP2A-202ENST00000577541 MROH9Q5TGP6 573 aa4.54□□□□□ -1.68
TOP2A-202ENST00000577541 ERMP1Q7Z2K6 904 aa4.54□□□□□ -1.68
TOP2A-202ENST00000577541 RIOX2Q8IUF8 465 aa4.54□□□□□ -1.68
TOP2A-202ENST00000577541 GZF1Q9H116 711 aaPredicted RBP4.54□□□□□ -1.68
TOP2A-202ENST00000577541 BTG4Q9NY30 223 aa4.54□□□□□ -1.68
TOP2A-202ENST00000577541 PTPN22Q9Y2R2 807 aa4.54□□□□□ -1.68
TOP2A-202ENST00000577541 PROB1E7EW31 1015 aa4.53□□□□□ -1.68
TOP2A-202ENST00000577541 LRG1P02750 347 aa4.53□□□□□ -1.68
TOP2A-202ENST00000577541 CR2P20023 1033 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms