RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 KCNJ6P48051 423 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 KLK7P49862 253 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 SLC7A5Q01650 507 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 KLRC3Q07444 240 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 CC2D1AQ6P1N0 951 aaPredicted RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 UBLCP1Q8WVY7 318 aaPredicted RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 SYDE2Q5VT97 1194 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 CCDC25Q86WR0 208 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 IFT20Q8IY31 132 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 LRRN4CLQ8ND94 238 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 LRRC53A6NM62 1247 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 WNT7AO00755 349 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 C21orf2O43822 256 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 TCP1P17987 556 aaKnown RBP12.74□□□□□ -0.37
CDH1-210ENST00000566612 MIER3Q7Z3K6 550 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 RAD54LQ92698 747 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 IQCDQ96DY2 449 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 CTTNBP2NLQ9P2B4 639 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 POLLQ9UGP5 575 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 TACC3Q9Y6A5 838 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 GPR75-ASB3A0A0A6YYF3 556 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
CDH1-210ENST00000566612 KRT5P13647 590 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 CETN2P41208 172 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 NAA35Q5VZE5 725 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 DAAM2Q86T65 1068 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 MYMKA6NI61 221 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 IVLP07476 585 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 LRRC63Q05C16 580 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 CCDC127Q96BQ5 260 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 MASTLQ96GX5 879 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
CDH1-210ENST00000566612 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 COASYQ13057 564 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 KCNB1Q14721 858 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 AOC3Q16853 763 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 TMED8Q6PL24 325 aaPredicted RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 MRC1P22897 1456 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 BIRC3Q13489 604 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 TERF2Q15554 542 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 ZSCAN26Q16670 478 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 CCPG1Q9ULG6 757 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 SPOPO43791 374 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 RHOBTB3O94955 611 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 ZNF18P17022 549 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 STAT2P52630 851 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 PPP4CP60510 307 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 RDXP35241 583 aaKnown RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 PRPHP41219 470 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 GFPT1Q06210 699 aaPredicted RBP12.73□□□□□ -0.37
CDH1-210ENST00000566612 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 PCIF1Q9H4Z3 704 aa12.73□□□□□ -0.37
CDH1-210ENST00000566612 PVALEFA0A1B0GWK0 134 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 K7ENM7 598 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 H2AFZP0C0S5 128 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 NT5C2P49902 561 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 PSMD2Q13200 908 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 CASP8Q14790 479 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 CDC42EP5Q6NZY7 148 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 H2AFVQ71UI9 128 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 USP37Q86T82 979 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 GIMAP8Q8ND71 665 aaPredicted RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 JRKLQ9Y4A0 524 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 MORC2Q9Y6X9 1032 aaPredicted RBP12.72□□□□□ -0.37
CDH1-210ENST00000566612 LRRN2O75325 713 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 SMTNP53814 917 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 SF3A3Q12874 501 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDH1-210ENST00000566612 RCSD1Q6JBY9 416 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
CDH1-210ENST00000566612 KRT12Q99456 494 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms