RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SIAH1Q8IUQ4 282 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 GLIS3Q8NEA6 775 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 GOLGA5Q8TBA6 731 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 LACRTQ9GZZ8 138 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 GOLPH3Q9H4A6 298 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 TDRD3Q9H7E2 651 aaKnown RBP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 ESYT3A0FGR9 886 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 LARGE2Q8N3Y3 721 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 GSDMAQ96QA5 445 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 PACSIN2Q9UNF0 486 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 KCTD16Q68DU8 428 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
LINC00661-204ENST00000549354 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
LINC00661-204ENST00000549354 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 GNA11P29992 359 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 PBX1P40424 430 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 TNNI2P48788 182 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 TCP10Q12799 353 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
LINC00661-204ENST00000549354 TBC1D10BQ4KMP7 808 aaPredicted RBP12.31□□□□□ -0.44
LINC00661-204ENST00000549354 TMEM179Q6ZVK1 233 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 SRLQ86TD4 932 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 PIGSQ96S52 555 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC00661-204ENST00000549354 MLXIPQ9HAP2 919 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 KRT25Q7Z3Z0 450 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 DCAF4Q8WV16 495 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
LINC00661-204ENST00000549354 HERC5Q9UII4 1024 aaKnown RBP12.31□□□□□ -0.44
LINC00661-204ENST00000549354 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 POTEMA6NI47 508 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 LAD1O00515 517 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 STK4Q13043 487 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 KSR1Q8IVT5 923 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 GMCL1P1Q8NEA9 526 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 FAM151AQ8WW52 585 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
LINC00661-204ENST00000549354 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
LINC00661-204ENST00000549354 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 ARFGEF1Q9Y6D6 1849 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 PNMA6FA0A0J9YX94 578 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 PRPHP41219 470 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
LINC00661-204ENST00000549354 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
LINC00661-204ENST00000549354 SAR1BQ9Y6B6 198 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 SMCO2A6NFE2 343 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 GGCXP38435 758 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 OR8K1Q8NGG5 319 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 JAKMIP2Q96AA8 810 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 CDK5RAP3Q96JB5 506 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 NOC4LQ9BVI4 516 aaKnown RBP12.3□□□□□ -0.44
LINC00661-204ENST00000549354 PGAP2Q9UHJ9 254 aa12.3□□□□□ -0.44
LINC00661-204ENST00000549354 LTBP3Q9NS15 1303 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 PDE2AO00408 941 aaPredicted RBP12.29□□□□□ -0.44
LINC00661-204ENST00000549354 AKR1B10O60218 316 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 TBC1D12O60347 775 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 RAD17O75943 681 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 EEF2P13639 858 aaKnown RBP12.29□□□□□ -0.44
LINC00661-204ENST00000549354 PLCG1P19174 1290 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 LONP1P36776 959 aaKnown RBP12.29□□□□□ -0.44
LINC00661-204ENST00000549354 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
LINC00661-204ENST00000549354 UBE2SQ16763 222 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
LINC00661-204ENST00000549354 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 ADGRF4Q8IZF3 695 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 PYM1Q9BRP8 204 aaKnown RBP12.29□□□□□ -0.44
LINC00661-204ENST00000549354 LRWD1Q9UFC0 647 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 POLD1P28340 1107 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 MAP3K10Q02779 954 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 MSANTD4Q8NCY6 345 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 GMCL1Q96IK5 515 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 ATP1A2P50993 1020 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 DLGAP5Q15398 846 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 E2F4Q16254 413 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 FAM83AQ86UY5 434 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 RAB21Q9UL25 225 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
LINC00661-204ENST00000549354 MOCS3O95396 460 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 HERVK_113P62684 666 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 WHAMMP3Q1A5X7 153 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 RRAGAQ7L523 313 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 MS4A14Q96JA4 679 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 BACH1O14867 736 aa12.28□□□□□ -0.44
LINC00661-204ENST00000549354 PPP1R11O60927 126 aaPredicted RBP12.28□□□□□ -0.44
LINC00661-204ENST00000549354 ZBTB7AO95365 584 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms