RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 ZNRF3Q9ULT6 936 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SUGT1Q9Y2Z0 365 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 EMC9Q9Y3B6 208 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SUPT16HQ9Y5B9 1047 aaKnown RBP0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PCDHB12Q9Y5F1 795 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TNFRSF18Q9Y5U5 241 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PMF1-BGLAPU3KQ54 211 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZMYM3Q14202 1370 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF536O15090 1300 aa0.64□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ARHGEF17Q96PE2 2063 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 A0A0A6YYK5 440 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NPHP3-ACAD11A0A0J9YXS1 232 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PRAMEF22A3QJZ6 481 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FITM1A5D6W6 292 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LEFTY2O00292 366 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 BIN1O00499 593 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MAN2B1O00754 1011 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SCDO00767 359 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF185O15231 689 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ADCY6O43306 1168 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KLF4O43474 513 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NARSO43776 548 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ADCY3O60266 1144 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PEX10O60683 326 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TADA3O75528 432 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KRT37O76014 449 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZFPL1O95159 310 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RAPGEF3O95398 923 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MPOP05164 745 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MMEP08473 750 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SNRPB2P08579 225 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CELA3BP08861 270 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CLEC2LP0C7M8 214 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ELFN1P0C7U0 828 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 XRCC5P13010 732 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PDIA4P13667 645 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C6P13671 934 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ATF4P18848 351 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLC9A1P19634 815 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LMNB1P20700 586 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DNAJA1P31689 397 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 BMP8BP34820 402 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF76P36508 570 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ETV3P41162 512 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MAGEA10P43363 369 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KIR3DL1P43629 444 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MAPKAPK2P49137 400 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RBM25P49756 843 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CLK3P49761 638 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RGS3P49796 1198 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DNM2P50570 870 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SCNN1GP51170 649 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KCNQ1P51787 676 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 YARSP54577 528 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 EIF6P56537 245 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 EVA1CP58658 441 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KRTAP10-9P60411 292 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLC7A5Q01650 507 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ATP2B2Q01814 1243 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SP2Q02086 613 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 EFEMP1Q12805 493 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NFATC3Q12968 1075 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DUSP8Q13202 625 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ADAM15Q13444 863 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TUSC3Q13454 348 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PCBP1Q15365 356 aaKnown RBP eCLIP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NR0B2Q15466 257 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SKIDA1Q1XH10 827 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CCDC27Q2M243 656 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CWF19L2Q2TBE0 894 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TKFCQ3LXA3 575 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 USP39Q53GS9 565 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLC35F1Q5T1Q4 408 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PRAMEF18Q5VWM3 479 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C1QL3Q5VWW1 255 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 HEATR6Q6AI08 1181 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PAQR3Q6TCH7 311 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RNF111Q6ZNA4 994 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TSHZ1Q6ZSZ6 1077 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 C22orf34Q6ZV56 151 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ANKS3Q6ZW76 656 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FILIP1Q7Z7B0 1213 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 STRA8Q7Z7C7 330 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GLCCI1Q86VQ1 547 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 JAMLQ86YT9 394 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SIAH1Q8IUQ4 282 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SYT12Q8IV01 421 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FAM178BQ8IXR5 827 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KBTBD2Q8IY47 623 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 OXR1Q8N573 874 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LZTR1Q8N653 840 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF655Q8N720 491 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NAT16Q8N8M0 369 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NSUN7Q8NE18 718 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 REPS2Q8NFH8 660 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PCDH19Q8TAB3 1148 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PIWIL2Q8TC59 973 aaKnown RBP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DDB2Q92466 427 aa0.63□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CRELD1Q96HD1 420 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms