RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 LGI4Q8N135 537 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 TMEM145Q8NBT3 493 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 MICAL1Q8TDZ2 1067 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 KCTD13Q8WZ19 329 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 TOE1Q96GM8 510 aaKnown RBP4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 EPB41L1Q9H4G0 881 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 ZNF408Q9H9D4 720 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 CLDND1Q9NY35 253 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 PCDHB4Q9Y5E5 795 aa4.81□□□□□ -1.64
RNU4-49P-201ENST00000516080 MROH6A6NGR9 719 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 MAFKO60675 156 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 TADA3O75528 432 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 CYP7B1O75881 506 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 CAPNS1P04632 268 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 MAP4K2Q12851 820 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 SLC10A6Q3KNW5 377 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 PRR31Q5SQ13 230 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 DENND5AQ6IQ26 1287 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 STK32CQ86UX6 486 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 PHOSPHO1Q8TCT1 267 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 C1orf159Q96HA4 380 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 GPR20Q99678 358 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 SYT3Q9BQG1 590 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 CCDC9Q9Y3X0 531 aaKnown RBP4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 NPFFR2Q9Y5X5 522 aa4.8□□□□□ -1.64
RNU4-49P-201ENST00000516080 TCRBV5S2A0A599 114 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 DDX3XO00571 662 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 PLATP00750 562 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 LCP1P13796 627 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 MAGEA10P43363 369 aaPredicted RBP4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 PPP2R2AP63151 447 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 ZXDCQ2QGD7 858 aaPredicted RBP4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 MCTP2Q6DN12 878 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 GGNQ86UU5 652 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 MCF2L2Q86YR7 1114 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 TXNDC5Q8NBS9 432 aaKnown RBP4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 SGSM3Q96HU1 749 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 LCORQ96JN0 433 aaPredicted RBP4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 CLIC6Q96NY7 704 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 WRNIP1Q96S55 665 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 RBM15Q96T37 977 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 TINF2Q9BSI4 451 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 SMOC1Q9H4F8 434 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 GPR27Q9NS67 375 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 SMPD4Q9NXE4 827 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 DTLQ9NZJ0 730 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 FBXL7Q9UJT9 491 aa4.79□□□□□ -1.64
RNU4-49P-201ENST00000516080 A0A1W2PQU0 124 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 IQCA1LA6NCM1 817 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 KRIT1O00522 736 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 ADAM9Q13443 819 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 HSP90AA2PQ14568 343 aaPredicted RBP4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 SURF1Q15526 300 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 TBC1D10BQ4KMP7 808 aaPredicted RBP4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 PRAMEF18Q5VWM3 479 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 CYP4F22Q6NT55 531 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 TEPPQ6URK8 271 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 TRIM48Q8IWZ4 208 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 SLC43A3Q8NBI5 491 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 ARRDC4Q8NCT1 418 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 SAMD11Q96NU1 681 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 TMEM209Q96SK2 561 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 MYOTQ9UBF9 498 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 INVSQ9Y283 1065 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 MYRFQ9Y2G1 1151 aa4.78□□□□□ -1.64
RNU4-49P-201ENST00000516080 CYP1A1P04798 512 aaPredicted RBP4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZNF28P17035 718 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 DNAJA1P31689 397 aaKnown RBP4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 IL13P35225 146 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 GRIA2P42262 883 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 DDR2Q16832 855 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 PLEKHH3Q7Z736 793 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 TTC9BQ8N6N2 239 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 GMLQ99445 158 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 IER2Q9BTL4 223 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 L2HGDHQ9H9P8 463 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 HSPBP1Q9NZL4 362 aa4.77□□□□□ -1.65
RNU4-49P-201ENST00000516080 ZNF536O15090 1300 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 DLX3O60479 287 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 LRG1P02750 347 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 INSRRP14616 1297 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 GLB1LQ6UWU2 654 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 ANKS3Q6ZW76 656 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 TTLL11Q8NHH1 800 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 HNRNPLLQ8WVV9 542 aaKnown RBP4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 LOXL4Q96JB6 756 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 TMEM168Q9H0V1 697 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 CDIP1Q9H305 208 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 ST7Q9NRC1 585 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 ASH2LQ9UBL3 628 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 NUB1Q9Y5A7 615 aa4.76□□□□□ -1.65
RNU4-49P-201ENST00000516080 FGFR1P11362 822 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 ADAM17P78536 824 aa4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 PUM1Q14671 1186 aaKnown RBP eCLIP4.75□□□□□ -1.65
RNU4-49P-201ENST00000516080 CPZQ66K79 652 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms