RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 CLDND1Q9NY35 253 aa8.28□□□□□ -1.08
SMN1-206ENST00000507905 GRIA2P42262 883 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 PPP2R2AP63151 447 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 FAM26FQ5R3K3 315 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 STEAP3Q658P3 488 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 MCTP2Q6DN12 878 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 HHIPL2Q6UWX4 724 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 C1orf159Q96HA4 380 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 ST7Q9NRC1 585 aa8.27□□□□□ -1.09
SMN1-206ENST00000507905 DDX3XO00571 662 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMN1-206ENST00000507905 DGKIO75912 1065 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 CAPNS1P04632 268 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 DNAJA1P31689 397 aaKnown RBP8.26□□□□□ -1.09
SMN1-206ENST00000507905 ZNF827Q17R98 1081 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 SLC10A6Q3KNW5 377 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 SLC35F1Q5T1Q4 408 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 GGNQ86UU5 652 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 ARRDC4Q8NCT1 418 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 KCTD13Q8WZ19 329 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 TOE1Q96GM8 510 aaKnown RBP8.26□□□□□ -1.09
SMN1-206ENST00000507905 NPFFR2Q9Y5X5 522 aa8.26□□□□□ -1.09
SMN1-206ENST00000507905 MROH6A6NGR9 719 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 TADA3O75528 432 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 ITGB3P05106 788 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 PRR31Q5SQ13 230 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 MCF2L2Q86YR7 1114 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 TXNDC5Q8NBS9 432 aaKnown RBP8.25□□□□□ -1.09
SMN1-206ENST00000507905 TINF2Q9BSI4 451 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 EPB41L1Q9H4G0 881 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
SMN1-206ENST00000507905 PCDHB4Q9Y5E5 795 aa8.25□□□□□ -1.09
SMN1-206ENST00000507905 A0A1W2PQU0 124 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 TCRBV5S2A0A599 114 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 MAP4K2Q12851 820 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 ZXDCQ2QGD7 858 aaPredicted RBP8.24□□□□□ -1.09
SMN1-206ENST00000507905 PRAMEF18Q5VWM3 479 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 BORAQ6PGQ7 559 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 LGI4Q8N135 537 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMN1-206ENST00000507905 DTLQ9NZJ0 730 aa8.24□□□□□ -1.09
SMN1-206ENST00000507905 PLATP00750 562 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 ADAM9Q13443 819 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 EMC4Q5J8M3 183 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 CELF2-AS1Q8N7Q2 184 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 HNRNPLLQ8WVV9 542 aaKnown RBP8.23□□□□□ -1.09
SMN1-206ENST00000507905 LCORQ96JN0 433 aaPredicted RBP8.23□□□□□ -1.09
SMN1-206ENST00000507905 RBM15Q96T37 977 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMN1-206ENST00000507905 GPR20Q99678 358 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 IER2Q9BTL4 223 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 INVSQ9Y283 1065 aa8.23□□□□□ -1.09
SMN1-206ENST00000507905 MAFKO60675 156 aa8.22□□□□□ -1.09
SMN1-206ENST00000507905 MAGEA10P43363 369 aaPredicted RBP8.22□□□□□ -1.09
SMN1-206ENST00000507905 TBC1D10BQ4KMP7 808 aaPredicted RBP8.22□□□□□ -1.09
SMN1-206ENST00000507905 TEPPQ6URK8 271 aa8.22□□□□□ -1.09
SMN1-206ENST00000507905 ANKS3Q6ZW76 656 aa8.22□□□□□ -1.09
SMN1-206ENST00000507905 SMOC1Q9H4F8 434 aa8.22□□□□□ -1.09
SMN1-206ENST00000507905 GPR27Q9NS67 375 aa8.22□□□□□ -1.09
SMN1-206ENST00000507905 MYOTQ9UBF9 498 aa8.22□□□□□ -1.09
SMN1-206ENST00000507905 KRIT1O00522 736 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 LRG1P02750 347 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 CYP1A1P04798 512 aaPredicted RBP8.21□□□□□ -1.1
SMN1-206ENST00000507905 INSRRP14616 1297 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
SMN1-206ENST00000507905 DDR2Q16832 855 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 PHOSPHO1Q8TCT1 267 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 CLIC6Q96NY7 704 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 SMPD4Q9NXE4 827 aa8.21□□□□□ -1.1
SMN1-206ENST00000507905 DLX3O60479 287 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 CYP7B1O75881 506 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 IL13P35225 146 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 USP53Q70EK8 1073 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 SGSM3Q96HU1 749 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 ZSWIM3Q96MP5 696 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 JAM3Q9BX67 310 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 L2HGDHQ9H9P8 463 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 ZNF536O15090 1300 aa8.2□□□□□ -1.1
SMN1-206ENST00000507905 C9orf118A6NHY6 69 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 ZNF28P17035 718 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 RSPO2Q6UXX9 243 aaPredicted RBP8.19□□□□□ -1.1
SMN1-206ENST00000507905 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 SLC43A3Q8NBI5 491 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 ZNF428Q96B54 188 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 TMEM209Q96SK2 561 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 GMLQ99445 158 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 SLC6A20Q9NP91 592 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 CROTQ9UKG9 612 aa8.19□□□□□ -1.1
SMN1-206ENST00000507905 IQCA1LA6NCM1 817 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 MSCO60682 206 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 MLLT6P55198 1093 aaPredicted RBP8.18□□□□□ -1.1
SMN1-206ENST00000507905 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 LOXL4Q96JB6 756 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 SAMD11Q96NU1 681 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 TMEM168Q9H0V1 697 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 MYRFQ9Y2G1 1151 aa8.18□□□□□ -1.1
SMN1-206ENST00000507905 KLF4O43474 513 aa8.17□□□□□ -1.1
SMN1-206ENST00000507905 PUM1Q14671 1186 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMN1-206ENST00000507905 SURF1Q15526 300 aa8.17□□□□□ -1.1
SMN1-206ENST00000507905 PIP4K2CQ8TBX8 421 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms