RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 BRDTQ58F21 947 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 MICU3Q86XE3 530 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 CCDC136Q96JN2 1154 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 FAM161BQ96MY7 647 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 SLC12A7Q9Y666 1083 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 PRUNE2Q8WUY3 3088 aa16.16■□□□□ 0.18
PDLIM7-211ENST00000504318 NID2Q14112 1375 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 GRXCR1A8MXD5 290 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 SPATA31C2B4DYI2 1134 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 SUPT20HL2P0C7V6 817 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 ZNF286BP0CG31 522 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 RBL2Q08999 1139 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 DGKDQ16760 1214 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 ZNF697Q5TEC3 545 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 RNF20Q5VTR2 975 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 NFXL1Q6ZNB6 911 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 PBX4Q9BYU1 374 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 GTF2IRD1Q9UHL9 959 aa16.15■□□□□ 0.18
PDLIM7-211ENST00000504318 STAM2O75886 525 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 GGPS1O95749 300 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 CPA1P15085 419 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 DNAJB2P25686 324 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 CDC27P30260 824 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 PBX2P40425 430 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 PSEN2P49810 448 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 TRIM71Q2Q1W2 868 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 TRAF7Q6Q0C0 670 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 FBXL16Q8N461 479 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 WNT8BQ93098 351 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 AGXT2Q9BYV1 514 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 SNX14Q9Y5W7 946 aa16.14■□□□□ 0.17
PDLIM7-211ENST00000504318 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 IQCF3P0C7M6 154 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 RCAN1P53805 252 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 MFSD10Q14728 455 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 FAM47CQ5HY64 1035 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 WWC2Q6AWC2 1192 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 DHX37Q8IY37 1157 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 SPTBN5Q9NRC6 3674 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 A0A0C4DFX4 3053 aa16.13■□□□□ 0.17
PDLIM7-211ENST00000504318 MYO9BQ13459 2157 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 SORBS3O60504 671 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 FGBP02675 491 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 KRT32Q14532 448 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 PTGISQ16647 500 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 UBE2SQ16763 222 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 KIAA0753Q2KHM9 967 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 OTOP2Q7RTS6 562 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 CCDC82Q8N4S0 544 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 SPATA33Q96N06 139 aa16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 SEC63Q9UGP8 760 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-211ENST00000504318 ITGB5P18084 799 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 XRRA1Q6P2D8 792 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 METTL7BQ6UX53 244 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 SMARCC2Q8TAQ2 1214 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 GPR20Q99678 358 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 SENP7Q9BQF6 1050 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 PSTPIP2Q9H939 334 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 RTEL1Q9NZ71 1219 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 YBX2Q9Y2T7 364 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 UBIAD1Q9Y5Z9 338 aa16.11■□□□□ 0.17
PDLIM7-211ENST00000504318 KLF18A0A0U1RQI7 1052 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 STXBP3O00186 592 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 ZBTB43O43298 467 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 FIBPO43427 364 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 ATP9AO75110 1047 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 CXCL10P02778 98 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 LGALS2P05162 132 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 PFKMP08237 780 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 KCNA2P16389 499 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 RFC2P35250 354 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 CLK2P49760 499 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 RTN1Q16799 776 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 KATNAL1Q9BW62 490 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 PPP4R2Q9NY27 417 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 SIP14410 1827 aa16.1■□□□□ 0.17
PDLIM7-211ENST00000504318 VCANP13611 3396 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 NBNO60934 754 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 HMGB1P09429 215 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 ADD1P35611 737 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 EVCP57679 992 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms