RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 BZW2Q9Y6E2 419 aaKnown RBP12.98□□□□□ -0.33
TRA2B-214ENST00000487615 ATRNO75882 1429 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 GOLGA6BA6NDN3 693 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 C21orf2O43822 256 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 H2AFZP0C0S5 128 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 KRT5P13647 590 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 SMARCA1P28370 1054 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 EIF4A3P38919 411 aaKnown RBP12.98□□□□□ -0.33
TRA2B-214ENST00000487615 H2AFVQ71UI9 128 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 KLHL7Q8IXQ5 586 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 PROM2Q8N271 834 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 ARFGAP2Q8N6H7 521 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 NACC1Q96RE7 527 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 BHMT2Q9H2M3 363 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 AFPP02771 609 aaKnown RBP12.98□□□□□ -0.33
TRA2B-214ENST00000487615 ARHGEF16Q5VV41 709 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 AFAP1L1Q8TED9 768 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 AS3MTQ9HBK9 375 aa12.98□□□□□ -0.33
TRA2B-214ENST00000487615 GBP2P32456 591 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-214ENST00000487615 PDIA5Q14554 519 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
TRA2B-214ENST00000487615 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-214ENST00000487615 GDAP1L1Q96MZ0 367 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 RHOBTB3O94955 611 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 KIF11P52732 1056 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 STRN3Q13033 797 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 LONRF2Q1L5Z9 754 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 OTUD6AQ7L8S5 288 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 TC2NQ8N9U0 490 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 PARD6BQ9BYG5 372 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 RSPH14Q9UHP6 348 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
TRA2B-214ENST00000487615 PALM3A6NDB9 673 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-214ENST00000487615 E9PMD0 336 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
TRA2B-214ENST00000487615 GYS1P13807 737 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 AOC3Q16853 763 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 XKR9Q5GH70 373 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 HHIPL2Q6UWX4 724 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 DNAI2Q9GZS0 605 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
TRA2B-214ENST00000487615 FCER1AP12319 257 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 MTF1Q14872 753 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 NCAPHQ15003 741 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 UBL4BQ8N7F7 174 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 DAGLBQ8NCG7 672 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 FAM20AQ96MK3 541 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 MTRF1LQ9UGC7 380 aaKnown RBP12.96□□□□□ -0.33
TRA2B-214ENST00000487615 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 ANKRD62A6NC57 917 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 POTECB2RU33 542 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 N4BP1O75113 896 aaKnown RBP12.96□□□□□ -0.33
TRA2B-214ENST00000487615 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.33
TRA2B-214ENST00000487615 COASYQ13057 564 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 TCHHQ07283 1943 aa12.96□□□□□ -0.33
TRA2B-214ENST00000487615 ESYT2A0FGR8 921 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 KCNK3O14649 394 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.34
TRA2B-214ENST00000487615 USP11P51784 963 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 CDC42EP5Q6NZY7 148 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 PARVGQ9HBI0 331 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 BCS1LQ9Y276 419 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 GOLGA6CA6NDK9 693 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 GOLGA6DP0CG33 693 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 ABCB4P21439 1286 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 GJC1P36383 396 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 GNPTABQ3T906 1256 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 NYAP1Q6ZVC0 841 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 RTFDC1Q9BY42 306 aaPredicted RBP12.96□□□□□ -0.34
TRA2B-214ENST00000487615 SYNCQ9H7C4 482 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 GOLGA6AQ9NYA3 693 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 AMFRQ9UKV5 643 aa12.96□□□□□ -0.34
TRA2B-214ENST00000487615 ITIH6Q6UXX5 1313 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 CLIC2O15247 247 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 ASNSP08243 561 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 DAAM2Q86T65 1068 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 KCNG1Q9UIX4 513 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 WTIPA6NIX2 430 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-214ENST00000487615 RNF187Q5TA31 235 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-214ENST00000487615 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 LRRC45Q96CN5 670 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 CEP63Q96MT8 703 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms